Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC002472.3-201ENST00000640124 621 ntBASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 AC009093.2-202ENST00000620513 2079 ntBASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 KRT8P4-201ENST00000509735 1454 ntBASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAM1L1Q8N609 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAM1L1Q8N609 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 AC018529.2-202ENST00000611482 3087 ntBASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 AC244107.1-201ENST00000442033 332 ntBASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 AL583810.1-201ENST00000553344 1045 ntBASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 MIR4683-201ENST00000579659 81 ntBASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 AC007292.2-201ENST00000593524 1812 ntBASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 BX088702.1-201ENST00000610784 235 ntBASIC14.79□□□□□ -0.04
TRAM1L1Q8N609 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms