Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 MTX1P1-201ENST00000440904 838 ntBASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 AC092658.1-201ENST00000505836 891 ntBASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 AC009955.4-201ENST00000597192 544 ntBASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 AC018529.2-202ENST00000611482 3087 ntBASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 AC005695.3-201ENST00000614522 232 ntBASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 AL096828.3-201ENST00000615354 462 ntBASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ARHGEF39Q8N4T4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 AL354877.1-201ENST00000424412 413 ntBASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 AC108725.1-201ENST00000495472 409 ntBASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 AC008825.2-201ENST00000603374 718 ntBASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 AC018735.1-201ENST00000437208 1502 ntBASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 NORAD-201ENST00000565493 5339 ntBASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ARHGEF39Q8N4T4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 MIR4538-201ENST00000581377 78 ntBASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 MIR6869-201ENST00000619434 62 ntBASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.09□□□□□ -0.15
ARHGEF39Q8N4T4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms