Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.42■□□□□ 0.06
SIX5Q8N196 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.42■□□□□ 0.06
SIX5Q8N196 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.42■□□□□ 0.06
SIX5Q8N196 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.42■□□□□ 0.06
SIX5Q8N196 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SIX5Q8N196 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.42■□□□□ 0.06
SIX5Q8N196 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIX5Q8N196 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIX5Q8N196 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIX5Q8N196 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.42■□□□□ 0.06
SIX5Q8N196 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SIX5Q8N196 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.42■□□□□ 0.06
SIX5Q8N196 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SIX5Q8N196 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIX5Q8N196 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIX5Q8N196 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIX5Q8N196 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SIX5Q8N196 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.42■□□□□ 0.06
SIX5Q8N196 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SIX5Q8N196 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SIX5Q8N196 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SIX5Q8N196 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SIX5Q8N196 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SIX5Q8N196 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.41■□□□□ 0.06
SIX5Q8N196 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SIX5Q8N196 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.41■□□□□ 0.06
SIX5Q8N196 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 AL627231.1-201ENST00000394467 1125 ntBASIC15.41■□□□□ 0.06
SIX5Q8N196 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 AL627389.1-201ENST00000413508 1182 ntBASIC15.41■□□□□ 0.06
SIX5Q8N196 KRT18P66-201ENST00000452970 1269 ntBASIC15.41■□□□□ 0.06
SIX5Q8N196 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.41■□□□□ 0.06
SIX5Q8N196 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.41■□□□□ 0.06
SIX5Q8N196 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.41■□□□□ 0.06
SIX5Q8N196 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC15.41■□□□□ 0.06
SIX5Q8N196 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.41■□□□□ 0.06
SIX5Q8N196 AL132994.2-201ENST00000603120 687 ntBASIC15.41■□□□□ 0.06
SIX5Q8N196 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SIX5Q8N196 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
SIX5Q8N196 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.41■□□□□ 0.06
SIX5Q8N196 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.41■□□□□ 0.06
SIX5Q8N196 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SIX5Q8N196 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.41■□□□□ 0.06
SIX5Q8N196 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.41■□□□□ 0.06
SIX5Q8N196 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.41■□□□□ 0.06
SIX5Q8N196 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SIX5Q8N196 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.41■□□□□ 0.06
SIX5Q8N196 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.41■□□□□ 0.06
SIX5Q8N196 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIX5Q8N196 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SIX5Q8N196 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.4■□□□□ 0.06
SIX5Q8N196 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.4■□□□□ 0.06
SIX5Q8N196 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.4■□□□□ 0.06
SIX5Q8N196 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.4■□□□□ 0.06
SIX5Q8N196 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.4■□□□□ 0.06
SIX5Q8N196 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.4■□□□□ 0.06
SIX5Q8N196 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.4■□□□□ 0.06
SIX5Q8N196 AC079112.1-201ENST00000454972 939 ntBASIC15.4■□□□□ 0.06
SIX5Q8N196 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC15.4■□□□□ 0.06
SIX5Q8N196 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms