Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 OR2A1-AS1-210ENST00000496968 531 ntBASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 AC093909.3-201ENST00000504783 336 ntBASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 MIR4472-1-201ENST00000584349 80 ntBASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 AC140113.1-201ENST00000603467 169 ntBASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 AL118522.1-201ENST00000611368 560 ntBASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 AL591471.1-201ENST00000621855 229 ntBASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 AC073592.2-201ENST00000623062 780 ntBASIC13.7□□□□□ -0.22
COL27A1Q8IZC6 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 NHP2-202ENST00000314397 599 ntTSL 2 BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 RN7SL564P-201ENST00000496309 250 ntBASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 TRMT112P3-201ENST00000580149 358 ntBASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 AC011247.3-201ENST00000603297 438 ntBASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 AC012073.1-201ENST00000606114 1108 ntBASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 AC007250.1-201ENST00000608934 338 ntBASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL27A1Q8IZC6 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 Z69890.1-201ENST00000382990 339 ntBASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 AL161932.2-201ENST00000435436 679 ntBASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 AC138466.4-201ENST00000623965 852 ntBASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 LAP3P2-201ENST00000454686 1454 ntBASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL27A1Q8IZC6 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms