Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 AC006504.5-208ENST00000588784 2401 ntBASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 AL928921.2-201ENST00000641325 2442 ntBASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 NUS1P3-201ENST00000423502 862 ntBASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 INGX-202ENST00000489074 768 ntBASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 AC026434.2-201ENST00000506094 1078 ntBASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 SERBP1P5-201ENST00000510079 1181 ntBASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 AC104596.2-201ENST00000512793 793 ntBASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 AC123567.1-201ENST00000548294 1261 ntBASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 AC099568.2-201ENST00000609194 695 ntBASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 AC008761.3-201ENST00000624803 892 ntBASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC83Q8IWF9 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 AC055811.4-201ENST00000624039 1754 ntBASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 TPT1P11-201ENST00000458482 498 ntBASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 AC093726.1-201ENST00000608064 963 ntBASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 AC152010.1-201ENST00000415779 2006 ntBASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CCDC83Q8IWF9 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms