Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 KRT8P29-201ENST00000420409 1371 ntBASIC16.7■□□□□ 0.26
TRIM50Q86XT4 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.7■□□□□ 0.26
TRIM50Q86XT4 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 NDUFV2P1-201ENST00000596415 907 ntBASIC16.7■□□□□ 0.26
TRIM50Q86XT4 AC009955.4-201ENST00000597192 544 ntBASIC16.7■□□□□ 0.26
TRIM50Q86XT4 AC138649.2-201ENST00000615886 705 ntBASIC16.7■□□□□ 0.26
TRIM50Q86XT4 AL162426.1-201ENST00000624141 743 ntBASIC16.7■□□□□ 0.26
TRIM50Q86XT4 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 AC091951.1-201ENST00000512854 2465 ntBASIC16.7■□□□□ 0.26
TRIM50Q86XT4 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM50Q86XT4 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 AC138035.3-201ENST00000622706 2791 ntBASIC16.69■□□□□ 0.26
TRIM50Q86XT4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM50Q86XT4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.68■□□□□ 0.26
TRIM50Q86XT4 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 AC003102.2-201ENST00000589195 1469 ntBASIC16.68■□□□□ 0.26
TRIM50Q86XT4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 SHC1P1-201ENST00000425230 1745 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms