Protein–RNA interactions for Protein: Q7Z3S7

CACNA2D4, Voltage-dependent calcium channel subunit alpha-2/delta-4, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4Q7Z3S7 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
CACNA2D4Q7Z3S7 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CACNA2D4Q7Z3S7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CACNA2D4Q7Z3S7 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 AC087499.6-201ENST00000411576 835 ntBASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 RN7SL752P-201ENST00000463779 287 ntBASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 AC011495.1-201ENST00000498085 584 ntBASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 LILRP1-201ENST00000444199 1370 ntBASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CACNA2D4Q7Z3S7 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 AL391825.1-201ENST00000457671 1364 ntBASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 DFFBP1-201ENST00000433250 979 ntBASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 INE1-201ENST00000456273 945 ntBASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 AC004066.1-201ENST00000502488 802 ntBASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 AL162274.1-201ENST00000617191 1098 ntBASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.57■□□□□ 0.24
CACNA2D4Q7Z3S7 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms