Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 KRT8P14-201ENST00000414254 1442 ntBASIC13.56□□□□□ -0.24
NHLRC1Q6VVB1 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 AL137783.1-201ENST00000623494 1896 ntBASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 SOCS2P1-201ENST00000417727 557 ntBASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.55□□□□□ -0.24
NHLRC1Q6VVB1 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 MYO15B-237ENST00000642007 4893 ntBASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 RNU1-114P-201ENST00000365297 166 ntBASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 AP001582.1-201ENST00000525856 295 ntBASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.54□□□□□ -0.24
NHLRC1Q6VVB1 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms