Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 SPTLC1P1-201ENST00000447199 261 ntBASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 HLA-V-204ENST00000476601 1289 ntBASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 ATP5G2P4-201ENST00000442175 420 ntBASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
FOXR1Q6PIV2 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.77■□□□□ 0.11
FOXR1Q6PIV2 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FOXR1Q6PIV2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FOXR1Q6PIV2 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
FOXR1Q6PIV2 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
FOXR1Q6PIV2 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FOXR1Q6PIV2 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FOXR1Q6PIV2 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
FOXR1Q6PIV2 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
FOXR1Q6PIV2 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
FOXR1Q6PIV2 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.77■□□□□ 0.11
FOXR1Q6PIV2 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 AL035456.1-201ENST00000456064 1369 ntBASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 AL591122.2-201ENST00000624125 1853 ntBASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 AC008738.7-201ENST00000609744 511 ntBASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 SPTSSB-204ENST00000617024 1292 ntBASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 HADH-202ENST00000403312 1752 ntTSL 5 BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXR1Q6PIV2 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms