Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 AC234783.1-201ENST00000441761 496 ntBASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 AC132938.4-201ENST00000623835 848 ntBASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCDC144NLQ6NUI1 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 AL137783.1-201ENST00000623494 1896 ntBASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 AC018665.1-201ENST00000622927 1362 ntBASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 TPM3P8-201ENST00000330554 643 ntBASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 AC016694.1-201ENST00000434179 700 ntBASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 USP32P1-208ENST00000506594 1164 ntBASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 AC145423.3-201ENST00000615987 467 ntBASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 AL157414.3-201ENST00000624276 1954 ntBASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.23□□□□□ -0.45
CCDC144NLQ6NUI1 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms