Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 AL356000.1-201ENST00000441073 1238 ntBASIC14.3□□□□□ -0.12
RIF1Q5UIP0 RGS5-216ENST00000449680 788 ntTSL 3 BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 IGHEP2-201ENST00000519308 1256 ntBASIC14.3□□□□□ -0.12
RIF1Q5UIP0 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 F11R-204ENST00000537746 1245 ntTSL 2 BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 KRT8P1-201ENST00000557533 1207 ntBASIC14.3□□□□□ -0.12
RIF1Q5UIP0 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 AP006248.1-201ENST00000610471 67 ntBASIC14.3□□□□□ -0.12
RIF1Q5UIP0 AC005865.2-202ENST00000635814 725 ntBASIC14.3□□□□□ -0.12
RIF1Q5UIP0 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 EEF1DP5-201ENST00000431410 772 ntBASIC14.29□□□□□ -0.12
RIF1Q5UIP0 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 OR51A9P-201ENST00000422578 911 ntBASIC14.29□□□□□ -0.12
RIF1Q5UIP0 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 AC003686.1-201ENST00000550956 1034 ntBASIC14.29□□□□□ -0.12
RIF1Q5UIP0 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 MIR6893-201ENST00000613458 69 ntBASIC14.29□□□□□ -0.12
RIF1Q5UIP0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIF1Q5UIP0 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 AL357143.1-203ENST00000639750 881 ntBASIC14.28□□□□□ -0.12
RIF1Q5UIP0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 AC138761.6-201ENST00000583997 1423 ntBASIC14.28□□□□□ -0.12
RIF1Q5UIP0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIF1Q5UIP0 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 831.2 ms