Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 SARS-202ENST00000369923 1882 ntTSL 5 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 WASH3P-207ENST00000560956 1394 ntBASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 HNRNPA1P42-201ENST00000458678 957 ntBASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 MIR6746-201ENST00000620971 63 ntBASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 DOC2GP-204ENST00000639052 2548 ntBASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 SRP14-204ENST00000558720 780 ntTSL 2 BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 MSANTD2P1-201ENST00000445341 1368 ntBASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 RN7SL564P-201ENST00000496309 250 ntBASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 AC117503.4-201ENST00000623229 1418 ntBASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 FUCA1P1-201ENST00000374476 1351 ntBASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VPS13DQ5THJ4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms