Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 AC004899.1-201ENST00000424687 1714 ntBASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 PGAM1P5-201ENST00000548011 764 ntBASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 NPM1P43-201ENST00000558669 786 ntBASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 AKR1B10P2-201ENST00000577332 927 ntBASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 RN7SL602P-201ENST00000578326 324 ntBASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 AC020922.3-201ENST00000595064 547 ntBASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 RN7SL736P-201ENST00000613111 269 ntBASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 AC103691.2-201ENST00000618824 433 ntBASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 AC006453.1-201ENST00000636037 1257 ntBASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 AL603764.1-201ENST00000636452 321 ntBASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 AC068587.8-201ENST00000641239 219 ntBASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 CICP23-201ENST00000605013 2741 ntBASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 AL158070.2-201ENST00000623713 1621 ntBASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 AC005089.1-201ENST00000619486 2241 ntBASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CTC1Q2NKJ3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 AL353637.1-201ENST00000451571 732 ntBASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 RN7SL818P-201ENST00000485099 259 ntBASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 AC125604.1-201ENST00000496255 707 ntBASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 AC004066.1-201ENST00000502488 802 ntBASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 RN7SL725P-201ENST00000606439 259 ntBASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 COX6A1P2-201ENST00000620597 330 ntBASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CTC1Q2NKJ3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CTC1Q2NKJ3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CTC1Q2NKJ3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.02■□□□□ 0.15
CTC1Q2NKJ3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CTC1Q2NKJ3 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.02■□□□□ 0.15
CTC1Q2NKJ3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CTC1Q2NKJ3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CTC1Q2NKJ3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.02■□□□□ 0.15
CTC1Q2NKJ3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CTC1Q2NKJ3 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CTC1Q2NKJ3 AC007191.1-201ENST00000623179 2995 ntBASIC16.02■□□□□ 0.15
CTC1Q2NKJ3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CTC1Q2NKJ3 AL157791.1-201ENST00000553667 1699 ntBASIC16.02■□□□□ 0.15
CTC1Q2NKJ3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.02■□□□□ 0.15
CTC1Q2NKJ3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CTC1Q2NKJ3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
CTC1Q2NKJ3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CTC1Q2NKJ3 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.01■□□□□ 0.15
CTC1Q2NKJ3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.01■□□□□ 0.15
CTC1Q2NKJ3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CTC1Q2NKJ3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CTC1Q2NKJ3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CTC1Q2NKJ3 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms