Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EFNB3Q15768 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.81□□□□□ -0.36
EFNB3Q15768 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
EFNB3Q15768 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
EFNB3Q15768 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EFNB3Q15768 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
EFNB3Q15768 RN7SKP175-201ENST00000408472 289 ntBASIC12.81□□□□□ -0.36
EFNB3Q15768 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.81□□□□□ -0.36
EFNB3Q15768 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.81□□□□□ -0.36
EFNB3Q15768 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
EFNB3Q15768 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
EFNB3Q15768 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
EFNB3Q15768 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12.81□□□□□ -0.36
EFNB3Q15768 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.81□□□□□ -0.36
EFNB3Q15768 AL109954.1-202ENST00000564051 2148 ntBASIC12.81□□□□□ -0.36
EFNB3Q15768 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.81□□□□□ -0.36
EFNB3Q15768 AC104982.3-201ENST00000581995 514 ntBASIC12.81□□□□□ -0.36
EFNB3Q15768 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.81□□□□□ -0.36
EFNB3Q15768 AC243960.2-201ENST00000600996 747 ntBASIC12.81□□□□□ -0.36
EFNB3Q15768 AL118558.3-201ENST00000607414 1079 ntBASIC12.81□□□□□ -0.36
EFNB3Q15768 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.81□□□□□ -0.36
EFNB3Q15768 AL096828.3-201ENST00000615354 462 ntBASIC12.81□□□□□ -0.36
EFNB3Q15768 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EFNB3Q15768 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
EFNB3Q15768 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EFNB3Q15768 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
EFNB3Q15768 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EFNB3Q15768 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
EFNB3Q15768 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
EFNB3Q15768 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
EFNB3Q15768 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EFNB3Q15768 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EFNB3Q15768 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
EFNB3Q15768 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.81□□□□□ -0.36
EFNB3Q15768 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
EFNB3Q15768 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
EFNB3Q15768 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.8□□□□□ -0.36
EFNB3Q15768 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
EFNB3Q15768 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.8□□□□□ -0.36
EFNB3Q15768 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.8□□□□□ -0.36
EFNB3Q15768 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 MIR1247-201ENST00000408206 136 ntBASIC12.8□□□□□ -0.36
EFNB3Q15768 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.8□□□□□ -0.36
EFNB3Q15768 HIST2H2BB-201ENST00000449108 381 ntBASIC12.8□□□□□ -0.36
EFNB3Q15768 AC004898.1-201ENST00000451057 766 ntBASIC12.8□□□□□ -0.36
EFNB3Q15768 AC104306.2-201ENST00000451877 341 ntBASIC12.8□□□□□ -0.36
EFNB3Q15768 KRT8P13-201ENST00000463294 1010 ntBASIC12.8□□□□□ -0.36
EFNB3Q15768 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.8□□□□□ -0.36
EFNB3Q15768 AP001258.2-201ENST00000529891 490 ntBASIC12.8□□□□□ -0.36
EFNB3Q15768 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.8□□□□□ -0.36
EFNB3Q15768 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.8□□□□□ -0.36
EFNB3Q15768 AC103810.3-201ENST00000583567 96 ntBASIC12.8□□□□□ -0.36
EFNB3Q15768 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.8□□□□□ -0.36
EFNB3Q15768 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.8□□□□□ -0.36
EFNB3Q15768 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
EFNB3Q15768 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.8□□□□□ -0.36
EFNB3Q15768 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
EFNB3Q15768 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.8□□□□□ -0.36
EFNB3Q15768 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.8□□□□□ -0.36
EFNB3Q15768 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.8□□□□□ -0.36
EFNB3Q15768 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
EFNB3Q15768 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
EFNB3Q15768 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
EFNB3Q15768 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
EFNB3Q15768 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
EFNB3Q15768 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
EFNB3Q15768 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
EFNB3Q15768 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
EFNB3Q15768 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.79□□□□□ -0.36
EFNB3Q15768 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
EFNB3Q15768 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms