Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.25□□□□□ -0.13
GABREP78334 FAM58BP-201ENST00000439056 645 ntBASIC14.25□□□□□ -0.13
GABREP78334 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.25□□□□□ -0.13
GABREP78334 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.25□□□□□ -0.13
GABREP78334 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 DUX4L46-201ENST00000566845 751 ntBASIC14.25□□□□□ -0.13
GABREP78334 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
GABREP78334 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.25□□□□□ -0.13
GABREP78334 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.25□□□□□ -0.13
GABREP78334 AC008805.1-201ENST00000590892 364 ntBASIC14.25□□□□□ -0.13
GABREP78334 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
GABREP78334 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
GABREP78334 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
GABREP78334 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
GABREP78334 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
GABREP78334 TBC1D3J-201ENST00000620719 1426 ntBASIC14.24□□□□□ -0.13
GABREP78334 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.24□□□□□ -0.13
GABREP78334 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.24□□□□□ -0.13
GABREP78334 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
GABREP78334 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
GABREP78334 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.24□□□□□ -0.13
GABREP78334 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 AC114501.1-201ENST00000445949 172 ntBASIC14.24□□□□□ -0.13
GABREP78334 AC073150.1-201ENST00000450406 1084 ntBASIC14.24□□□□□ -0.13
GABREP78334 RN7SL8P-201ENST00000461771 266 ntBASIC14.24□□□□□ -0.13
GABREP78334 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.24□□□□□ -0.13
GABREP78334 PGAM1P5-201ENST00000548011 764 ntBASIC14.24□□□□□ -0.13
GABREP78334 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.24□□□□□ -0.13
GABREP78334 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.24□□□□□ -0.13
GABREP78334 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
GABREP78334 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.24□□□□□ -0.13
GABREP78334 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.24□□□□□ -0.13
GABREP78334 HLA-C-210ENST00000640219 976 ntBASIC14.24□□□□□ -0.13
GABREP78334 AL805961.1-201ENST00000642026 753 ntBASIC14.24□□□□□ -0.13
GABREP78334 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
GABREP78334 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC14.24□□□□□ -0.13
GABREP78334 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.24□□□□□ -0.13
GABREP78334 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.24□□□□□ -0.13
GABREP78334 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABREP78334 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
GABREP78334 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
GABREP78334 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABREP78334 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GABREP78334 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABREP78334 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABREP78334 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABREP78334 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.23□□□□□ -0.13
GABREP78334 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
GABREP78334 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABREP78334 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
GABREP78334 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
GABREP78334 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
GABREP78334 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABREP78334 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABREP78334 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
GABREP78334 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABREP78334 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABREP78334 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABREP78334 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GABREP78334 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms