Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H3AP68431 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
HIST1H3AP68431 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
HIST1H3AP68431 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H3AP68431 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H3AP68431 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
HIST1H3AP68431 AC012441.1-201ENST00000446669 685 ntBASIC13.14□□□□□ -0.31
HIST1H3AP68431 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H3AP68431 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.14□□□□□ -0.31
HIST1H3AP68431 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.14□□□□□ -0.31
HIST1H3AP68431 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.14□□□□□ -0.31
HIST1H3AP68431 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H3AP68431 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.14□□□□□ -0.31
HIST1H3AP68431 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 AC003102.2-201ENST00000589195 1469 ntBASIC13.14□□□□□ -0.31
HIST1H3AP68431 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
HIST1H3AP68431 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.14□□□□□ -0.31
HIST1H3AP68431 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
HIST1H3AP68431 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 AC104581.4-201ENST00000623126 3052 ntBASIC13.14□□□□□ -0.31
HIST1H3AP68431 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H3AP68431 AL138725.1-201ENST00000407347 1314 ntBASIC13.13□□□□□ -0.31
HIST1H3AP68431 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.13□□□□□ -0.31
HIST1H3AP68431 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.13□□□□□ -0.31
HIST1H3AP68431 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H3AP68431 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
HIST1H3AP68431 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H3AP68431 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.13□□□□□ -0.31
HIST1H3AP68431 BX640514.1-201ENST00000583223 1918 ntBASIC13.13□□□□□ -0.31
HIST1H3AP68431 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.13□□□□□ -0.31
HIST1H3AP68431 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H3AP68431 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H3AP68431 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
HIST1H3AP68431 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.13□□□□□ -0.31
HIST1H3AP68431 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H3AP68431 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H3AP68431 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
HIST1H3AP68431 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H3AP68431 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
HIST1H3AP68431 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HIST1H3AP68431 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.13□□□□□ -0.31
HIST1H3AP68431 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H3AP68431 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H3AP68431 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H3AP68431 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H3AP68431 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H3AP68431 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H3AP68431 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
HIST1H3AP68431 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H3AP68431 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.13□□□□□ -0.31
HIST1H3AP68431 AC007969.1-201ENST00000433675 447 ntBASIC13.13□□□□□ -0.31
HIST1H3AP68431 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H3AP68431 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.13□□□□□ -0.31
HIST1H3AP68431 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.13□□□□□ -0.31
HIST1H3AP68431 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.13□□□□□ -0.31
HIST1H3AP68431 AC138761.1-201ENST00000584393 385 ntBASIC13.13□□□□□ -0.31
HIST1H3AP68431 AC004466.1-201ENST00000599515 1080 ntBASIC13.13□□□□□ -0.31
HIST1H3AP68431 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
HIST1H3AP68431 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H3AP68431 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HIST1H3AP68431 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
HIST1H3AP68431 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H3AP68431 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H3AP68431 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H3AP68431 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.13□□□□□ -0.31
HIST1H3AP68431 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H3AP68431 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.13□□□□□ -0.31
HIST1H3AP68431 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H3AP68431 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H3AP68431 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H3AP68431 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H3AP68431 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H3AP68431 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H3AP68431 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H3AP68431 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H3AP68431 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.12□□□□□ -0.31
HIST1H3AP68431 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms