Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBA52P62987 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.1□□□□□ -0.31
UBA52P62987 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBA52P62987 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
UBA52P62987 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UBA52P62987 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBA52P62987 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.1□□□□□ -0.31
UBA52P62987 AC005622.1-201ENST00000636801 1703 ntBASIC13.1□□□□□ -0.31
UBA52P62987 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBA52P62987 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UBA52P62987 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.1□□□□□ -0.31
UBA52P62987 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
UBA52P62987 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.09□□□□□ -0.31
UBA52P62987 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
UBA52P62987 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.09□□□□□ -0.31
UBA52P62987 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
UBA52P62987 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
UBA52P62987 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.09□□□□□ -0.31
UBA52P62987 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.09□□□□□ -0.31
UBA52P62987 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 AC023024.2-201ENST00000623561 1993 ntBASIC13.09□□□□□ -0.31
UBA52P62987 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
UBA52P62987 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.09□□□□□ -0.31
UBA52P62987 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 DGCR5-201ENST00000399539 862 ntBASIC13.09□□□□□ -0.31
UBA52P62987 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.09□□□□□ -0.31
UBA52P62987 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.09□□□□□ -0.31
UBA52P62987 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
UBA52P62987 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.09□□□□□ -0.31
UBA52P62987 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 INE1-201ENST00000456273 945 ntBASIC13.09□□□□□ -0.31
UBA52P62987 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
UBA52P62987 AC011495.1-201ENST00000498085 584 ntBASIC13.09□□□□□ -0.31
UBA52P62987 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
UBA52P62987 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.09□□□□□ -0.31
UBA52P62987 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
UBA52P62987 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 HILS1-202ENST00000545329 423 ntBASIC13.09□□□□□ -0.31
UBA52P62987 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.09□□□□□ -0.31
UBA52P62987 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.09□□□□□ -0.31
UBA52P62987 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.09□□□□□ -0.31
UBA52P62987 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.09□□□□□ -0.31
UBA52P62987 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
UBA52P62987 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
UBA52P62987 AC099521.3-201ENST00000624251 2938 ntBASIC13.09□□□□□ -0.31
UBA52P62987 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
UBA52P62987 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.09□□□□□ -0.31
UBA52P62987 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.09□□□□□ -0.31
UBA52P62987 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
UBA52P62987 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.09□□□□□ -0.31
UBA52P62987 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UBA52P62987 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
UBA52P62987 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
UBA52P62987 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
UBA52P62987 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
UBA52P62987 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
UBA52P62987 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
UBA52P62987 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
UBA52P62987 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
UBA52P62987 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.08□□□□□ -0.32
UBA52P62987 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.08□□□□□ -0.32
UBA52P62987 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.08□□□□□ -0.32
UBA52P62987 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.08□□□□□ -0.32
UBA52P62987 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms