Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
AP3S2P59780 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S2P59780 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
AP3S2P59780 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
AP3S2P59780 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
AP3S2P59780 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S2P59780 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.95□□□□□ -0.34
AP3S2P59780 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.95□□□□□ -0.34
AP3S2P59780 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
AP3S2P59780 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S2P59780 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S2P59780 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S2P59780 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S2P59780 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S2P59780 MEX3B-202ENST00000558133 4333 ntBASIC12.95□□□□□ -0.34
AP3S2P59780 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.95□□□□□ -0.34
AP3S2P59780 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
AP3S2P59780 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
AP3S2P59780 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S2P59780 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S2P59780 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S2P59780 HLA-H-201ENST00000383620 1096 ntBASIC12.95□□□□□ -0.34
AP3S2P59780 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S2P59780 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC12.95□□□□□ -0.34
AP3S2P59780 ISCU-203ENST00000431221 799 ntTSL 2 BASIC12.95□□□□□ -0.34
AP3S2P59780 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.95□□□□□ -0.34
AP3S2P59780 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.95□□□□□ -0.34
AP3S2P59780 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.95□□□□□ -0.34
AP3S2P59780 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.95□□□□□ -0.34
AP3S2P59780 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.95□□□□□ -0.34
AP3S2P59780 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.95□□□□□ -0.34
AP3S2P59780 AL138918.1-201ENST00000568306 659 ntBASIC12.95□□□□□ -0.34
AP3S2P59780 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.95□□□□□ -0.34
AP3S2P59780 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC12.95□□□□□ -0.34
AP3S2P59780 AC010507.1-201ENST00000633895 436 ntBASIC12.95□□□□□ -0.34
AP3S2P59780 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S2P59780 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
AP3S2P59780 AC023794.5-201ENST00000564380 2157 ntBASIC12.95□□□□□ -0.34
AP3S2P59780 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S2P59780 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.95□□□□□ -0.34
AP3S2P59780 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
AP3S2P59780 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.95□□□□□ -0.34
AP3S2P59780 AC004899.2-201ENST00000622993 3860 ntBASIC12.95□□□□□ -0.34
AP3S2P59780 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S2P59780 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S2P59780 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S2P59780 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S2P59780 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S2P59780 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
AP3S2P59780 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S2P59780 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S2P59780 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S2P59780 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP3S2P59780 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
AP3S2P59780 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.94□□□□□ -0.34
AP3S2P59780 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
AP3S2P59780 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
AP3S2P59780 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.94□□□□□ -0.34
AP3S2P59780 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.94□□□□□ -0.34
AP3S2P59780 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 AC020910.6-201ENST00000623084 1459 ntBASIC12.94□□□□□ -0.34
AP3S2P59780 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
AP3S2P59780 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
AP3S2P59780 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.94□□□□□ -0.34
AP3S2P59780 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.94□□□□□ -0.34
AP3S2P59780 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.94□□□□□ -0.34
AP3S2P59780 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.94□□□□□ -0.34
AP3S2P59780 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 RNPS1P1-201ENST00000507437 918 ntBASIC12.94□□□□□ -0.34
AP3S2P59780 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.94□□□□□ -0.34
AP3S2P59780 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.94□□□□□ -0.34
AP3S2P59780 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 AC117500.6-201ENST00000624871 588 ntBASIC12.94□□□□□ -0.34
AP3S2P59780 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.94□□□□□ -0.34
AP3S2P59780 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.94□□□□□ -0.34
AP3S2P59780 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.94□□□□□ -0.34
AP3S2P59780 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AP3S2P59780 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.94□□□□□ -0.34
AP3S2P59780 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms