Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VSX2P58304 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VSX2P58304 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.43□□□□□ -0.1
VSX2P58304 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
VSX2P58304 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.43□□□□□ -0.1
VSX2P58304 AL354989.2-201ENST00000435838 1540 ntBASIC14.43□□□□□ -0.1
VSX2P58304 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VSX2P58304 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.43□□□□□ -0.1
VSX2P58304 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.43□□□□□ -0.1
VSX2P58304 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VSX2P58304 AC006001.1-201ENST00000325130 474 ntBASIC14.43□□□□□ -0.1
VSX2P58304 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.43□□□□□ -0.1
VSX2P58304 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.43□□□□□ -0.1
VSX2P58304 MIR1202-201ENST00000408529 83 ntBASIC14.43□□□□□ -0.1
VSX2P58304 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.43□□□□□ -0.1
VSX2P58304 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VSX2P58304 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.43□□□□□ -0.1
VSX2P58304 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.43□□□□□ -0.1
VSX2P58304 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.43□□□□□ -0.1
VSX2P58304 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.43□□□□□ -0.1
VSX2P58304 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.43□□□□□ -0.1
VSX2P58304 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VSX2P58304 AC004466.1-201ENST00000599515 1080 ntBASIC14.43□□□□□ -0.1
VSX2P58304 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.43□□□□□ -0.1
VSX2P58304 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VSX2P58304 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
VSX2P58304 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.43□□□□□ -0.1
VSX2P58304 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VSX2P58304 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.43□□□□□ -0.1
VSX2P58304 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
VSX2P58304 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VSX2P58304 AC023157.3-201ENST00000619086 2088 ntBASIC14.43□□□□□ -0.1
VSX2P58304 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VSX2P58304 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.43□□□□□ -0.1
VSX2P58304 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.43□□□□□ -0.1
VSX2P58304 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.43□□□□□ -0.1
VSX2P58304 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
VSX2P58304 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.43□□□□□ -0.1
VSX2P58304 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VSX2P58304 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.43□□□□□ -0.1
VSX2P58304 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VSX2P58304 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VSX2P58304 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.43□□□□□ -0.1
VSX2P58304 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VSX2P58304 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.42□□□□□ -0.1
VSX2P58304 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VSX2P58304 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VSX2P58304 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.42□□□□□ -0.1
VSX2P58304 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VSX2P58304 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VSX2P58304 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VSX2P58304 AC104581.4-201ENST00000623126 3052 ntBASIC14.42□□□□□ -0.1
VSX2P58304 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
VSX2P58304 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.42□□□□□ -0.1
VSX2P58304 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VSX2P58304 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VSX2P58304 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.42□□□□□ -0.1
VSX2P58304 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VSX2P58304 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.42□□□□□ -0.1
VSX2P58304 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.42□□□□□ -0.1
VSX2P58304 RPS2P32-201ENST00000439199 892 ntBASIC14.42□□□□□ -0.1
VSX2P58304 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.42□□□□□ -0.1
VSX2P58304 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.42□□□□□ -0.1
VSX2P58304 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VSX2P58304 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.42□□□□□ -0.1
VSX2P58304 AC006453.4-201ENST00000636949 1252 ntBASIC14.42□□□□□ -0.1
VSX2P58304 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
VSX2P58304 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.42□□□□□ -0.1
VSX2P58304 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.42□□□□□ -0.1
VSX2P58304 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
VSX2P58304 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
VSX2P58304 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
VSX2P58304 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VSX2P58304 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VSX2P58304 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.42□□□□□ -0.1
VSX2P58304 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VSX2P58304 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VSX2P58304 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VSX2P58304 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.42□□□□□ -0.1
VSX2P58304 AC006058.4-201ENST00000624016 1670 ntBASIC14.42□□□□□ -0.1
VSX2P58304 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VSX2P58304 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VSX2P58304 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VSX2P58304 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
VSX2P58304 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VSX2P58304 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VSX2P58304 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VSX2P58304 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VSX2P58304 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
VSX2P58304 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VSX2P58304 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.42□□□□□ -0.1
VSX2P58304 CICP4-201ENST00000447359 2812 ntBASIC14.42□□□□□ -0.1
VSX2P58304 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VSX2P58304 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.42□□□□□ -0.1
VSX2P58304 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
VSX2P58304 AHCYP2-201ENST00000430630 1300 ntBASIC14.41□□□□□ -0.1
VSX2P58304 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.41□□□□□ -0.1
VSX2P58304 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
VSX2P58304 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms