Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.57□□□□□ -0.24
SUMO3P55854 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SUMO3P55854 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.57□□□□□ -0.24
SUMO3P55854 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
SUMO3P55854 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SUMO3P55854 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.57□□□□□ -0.24
SUMO3P55854 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.57□□□□□ -0.24
SUMO3P55854 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SUMO3P55854 AL161772.1-201ENST00000610494 4412 ntBASIC13.57□□□□□ -0.24
SUMO3P55854 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SUMO3P55854 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.57□□□□□ -0.24
SUMO3P55854 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SUMO3P55854 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.57□□□□□ -0.24
SUMO3P55854 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SUMO3P55854 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
SUMO3P55854 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SUMO3P55854 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.57□□□□□ -0.24
SUMO3P55854 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.57□□□□□ -0.24
SUMO3P55854 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.57□□□□□ -0.24
SUMO3P55854 TPT1P11-201ENST00000458482 498 ntBASIC13.57□□□□□ -0.24
SUMO3P55854 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SUMO3P55854 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.57□□□□□ -0.24
SUMO3P55854 AL391280.1-201ENST00000506969 1062 ntBASIC13.57□□□□□ -0.24
SUMO3P55854 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.57□□□□□ -0.24
SUMO3P55854 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.57□□□□□ -0.24
SUMO3P55854 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SUMO3P55854 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.57□□□□□ -0.24
SUMO3P55854 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SUMO3P55854 OR10B1P-201ENST00000601666 907 ntBASIC13.57□□□□□ -0.24
SUMO3P55854 BX088702.1-201ENST00000610784 235 ntBASIC13.57□□□□□ -0.24
SUMO3P55854 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
SUMO3P55854 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SUMO3P55854 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.57□□□□□ -0.24
SUMO3P55854 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SUMO3P55854 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SUMO3P55854 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SUMO3P55854 AHCYP2-201ENST00000430630 1300 ntBASIC13.57□□□□□ -0.24
SUMO3P55854 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SUMO3P55854 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SUMO3P55854 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SUMO3P55854 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SUMO3P55854 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
SUMO3P55854 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.57□□□□□ -0.24
SUMO3P55854 AL136172.1-201ENST00000598590 1394 ntBASIC13.57□□□□□ -0.24
SUMO3P55854 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SUMO3P55854 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
SUMO3P55854 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.56□□□□□ -0.24
SUMO3P55854 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.56□□□□□ -0.24
SUMO3P55854 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.56□□□□□ -0.24
SUMO3P55854 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
SUMO3P55854 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SUMO3P55854 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SUMO3P55854 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.56□□□□□ -0.24
SUMO3P55854 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.56□□□□□ -0.24
SUMO3P55854 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.56□□□□□ -0.24
SUMO3P55854 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.56□□□□□ -0.24
SUMO3P55854 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.56□□□□□ -0.24
SUMO3P55854 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 AC079776.1-201ENST00000401540 1152 ntBASIC13.56□□□□□ -0.24
SUMO3P55854 AL136309.1-201ENST00000403917 691 ntBASIC13.56□□□□□ -0.24
SUMO3P55854 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.56□□□□□ -0.24
SUMO3P55854 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.56□□□□□ -0.24
SUMO3P55854 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.56□□□□□ -0.24
SUMO3P55854 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.56□□□□□ -0.24
SUMO3P55854 AC023310.1-201ENST00000554836 735 ntBASIC13.56□□□□□ -0.24
SUMO3P55854 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.56□□□□□ -0.24
SUMO3P55854 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.56□□□□□ -0.24
SUMO3P55854 RN7SL713P-201ENST00000582127 302 ntBASIC13.56□□□□□ -0.24
SUMO3P55854 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.56□□□□□ -0.24
SUMO3P55854 AL512343.1-201ENST00000605837 169 ntBASIC13.56□□□□□ -0.24
SUMO3P55854 ZACNP1-201ENST00000612259 710 ntBASIC13.56□□□□□ -0.24
SUMO3P55854 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.56□□□□□ -0.24
SUMO3P55854 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.56□□□□□ -0.24
SUMO3P55854 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.56□□□□□ -0.24
SUMO3P55854 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SUMO3P55854 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.56□□□□□ -0.24
SUMO3P55854 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
SUMO3P55854 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.56□□□□□ -0.24
SUMO3P55854 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms