Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 AC106886.1-201ENST00000568660 600 ntBASIC14.9□□□□□ -0.02
ZNF140P52738 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.9□□□□□ -0.02
ZNF140P52738 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF140P52738 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
ZNF140P52738 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
ZNF140P52738 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF140P52738 AC006453.4-201ENST00000636949 1252 ntBASIC14.9□□□□□ -0.02
ZNF140P52738 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
ZNF140P52738 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF140P52738 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF140P52738 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF140P52738 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF140P52738 AC015802.1-201ENST00000588104 1449 ntBASIC14.9□□□□□ -0.02
ZNF140P52738 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
ZNF140P52738 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF140P52738 MRPL37P1-201ENST00000592451 1337 ntBASIC14.9□□□□□ -0.02
ZNF140P52738 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF140P52738 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ZNF140P52738 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF140P52738 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.9□□□□□ -0.02
ZNF140P52738 AGGF1P1-201ENST00000509500 2073 ntBASIC14.89□□□□□ -0.03
ZNF140P52738 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
ZNF140P52738 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
ZNF140P52738 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ZNF140P52738 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.89□□□□□ -0.03
ZNF140P52738 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.89□□□□□ -0.03
ZNF140P52738 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.89□□□□□ -0.03
ZNF140P52738 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ZNF140P52738 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.89□□□□□ -0.03
ZNF140P52738 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.89□□□□□ -0.03
ZNF140P52738 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.89□□□□□ -0.03
ZNF140P52738 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ZNF140P52738 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.89□□□□□ -0.03
ZNF140P52738 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.89□□□□□ -0.03
ZNF140P52738 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.89□□□□□ -0.03
ZNF140P52738 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ZNF140P52738 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
ZNF140P52738 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.89□□□□□ -0.03
ZNF140P52738 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.89□□□□□ -0.03
ZNF140P52738 OR10B1P-201ENST00000601666 907 ntBASIC14.89□□□□□ -0.03
ZNF140P52738 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ZNF140P52738 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ZNF140P52738 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
ZNF140P52738 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ZNF140P52738 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.89□□□□□ -0.03
ZNF140P52738 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ZNF140P52738 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.89□□□□□ -0.03
ZNF140P52738 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF140P52738 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF140P52738 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF140P52738 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF140P52738 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF140P52738 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF140P52738 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.88□□□□□ -0.03
ZNF140P52738 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF140P52738 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF140P52738 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF140P52738 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF140P52738 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ZNF140P52738 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF140P52738 PDIA3P1-201ENST00000471856 1510 ntBASIC14.88□□□□□ -0.03
ZNF140P52738 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF140P52738 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF140P52738 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF140P52738 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF140P52738 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF140P52738 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.88□□□□□ -0.03
ZNF140P52738 AC006001.1-201ENST00000325130 474 ntBASIC14.88□□□□□ -0.03
ZNF140P52738 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.88□□□□□ -0.03
ZNF140P52738 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms