Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NEK3P51956 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NEK3P51956 AC134312.5-201ENST00000568031 1313 ntBASIC15.54■□□□□ 0.08
NEK3P51956 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
NEK3P51956 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NEK3P51956 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.54■□□□□ 0.08
NEK3P51956 ACKR1-201ENST00000368121 1240 ntBASIC15.54■□□□□ 0.08
NEK3P51956 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NEK3P51956 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.54■□□□□ 0.08
NEK3P51956 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.54■□□□□ 0.08
NEK3P51956 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.54■□□□□ 0.08
NEK3P51956 BCRP2-202ENST00000447763 634 ntBASIC15.54■□□□□ 0.08
NEK3P51956 BCRP6-201ENST00000510112 632 ntBASIC15.54■□□□□ 0.08
NEK3P51956 BCRP7-201ENST00000511549 544 ntBASIC15.54■□□□□ 0.08
NEK3P51956 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.54■□□□□ 0.08
NEK3P51956 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
NEK3P51956 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NEK3P51956 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NEK3P51956 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NEK3P51956 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.54■□□□□ 0.08
NEK3P51956 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NEK3P51956 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NEK3P51956 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NEK3P51956 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NEK3P51956 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
NEK3P51956 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.54■□□□□ 0.08
NEK3P51956 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NEK3P51956 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.54■□□□□ 0.08
NEK3P51956 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NEK3P51956 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.54■□□□□ 0.08
NEK3P51956 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NEK3P51956 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NEK3P51956 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.53■□□□□ 0.08
NEK3P51956 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NEK3P51956 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NEK3P51956 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.53■□□□□ 0.08
NEK3P51956 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NEK3P51956 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NEK3P51956 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.53■□□□□ 0.08
NEK3P51956 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NEK3P51956 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NEK3P51956 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
NEK3P51956 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
NEK3P51956 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NEK3P51956 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NEK3P51956 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NEK3P51956 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
NEK3P51956 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.53■□□□□ 0.08
NEK3P51956 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NEK3P51956 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
NEK3P51956 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NEK3P51956 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NEK3P51956 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.53■□□□□ 0.08
NEK3P51956 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.53■□□□□ 0.08
NEK3P51956 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.53■□□□□ 0.08
NEK3P51956 GHSR-202ENST00000427970 912 ntBASIC15.53■□□□□ 0.08
NEK3P51956 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.53■□□□□ 0.08
NEK3P51956 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NEK3P51956 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.53■□□□□ 0.08
NEK3P51956 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NEK3P51956 AC022137.2-201ENST00000503482 481 ntBASIC15.53■□□□□ 0.08
NEK3P51956 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
NEK3P51956 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.53■□□□□ 0.08
NEK3P51956 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.53■□□□□ 0.08
NEK3P51956 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.53■□□□□ 0.08
NEK3P51956 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
NEK3P51956 AP000845.1-201ENST00000581677 2131 ntBASIC15.53■□□□□ 0.08
NEK3P51956 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NEK3P51956 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
NEK3P51956 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NEK3P51956 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NEK3P51956 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NEK3P51956 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NEK3P51956 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NEK3P51956 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NEK3P51956 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
NEK3P51956 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NEK3P51956 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NEK3P51956 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NEK3P51956 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NEK3P51956 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NEK3P51956 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NEK3P51956 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NEK3P51956 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.52■□□□□ 0.08
NEK3P51956 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.52■□□□□ 0.08
NEK3P51956 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NEK3P51956 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NEK3P51956 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NEK3P51956 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.52■□□□□ 0.08
NEK3P51956 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
NEK3P51956 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
NEK3P51956 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
NEK3P51956 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
NEK3P51956 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.52■□□□□ 0.08
NEK3P51956 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NEK3P51956 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NEK3P51956 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
NEK3P51956 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
NEK3P51956 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
NEK3P51956 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms