Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
USP11P51784 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
USP11P51784 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.91■□□□□ 0.3
USP11P51784 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 EEF1DP1-201ENST00000585891 896 ntBASIC16.91■□□□□ 0.3
USP11P51784 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.91■□□□□ 0.3
USP11P51784 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.91■□□□□ 0.3
USP11P51784 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.91■□□□□ 0.3
USP11P51784 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.91■□□□□ 0.3
USP11P51784 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.91■□□□□ 0.3
USP11P51784 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.91■□□□□ 0.3
USP11P51784 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
USP11P51784 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
USP11P51784 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.91■□□□□ 0.3
USP11P51784 MRPL37P1-201ENST00000592451 1337 ntBASIC16.91■□□□□ 0.3
USP11P51784 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.91■□□□□ 0.3
USP11P51784 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP11P51784 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP11P51784 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.9■□□□□ 0.3
USP11P51784 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP11P51784 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP11P51784 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.9■□□□□ 0.3
USP11P51784 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.9■□□□□ 0.3
USP11P51784 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
USP11P51784 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP11P51784 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP11P51784 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.9■□□□□ 0.3
USP11P51784 CICP24-201ENST00000605464 2705 ntBASIC16.9■□□□□ 0.3
USP11P51784 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
USP11P51784 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP11P51784 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USP11P51784 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP11P51784 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USP11P51784 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.9■□□□□ 0.3
USP11P51784 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.9■□□□□ 0.3
USP11P51784 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.9■□□□□ 0.3
USP11P51784 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
USP11P51784 RN7SL560P-201ENST00000577943 264 ntBASIC16.9■□□□□ 0.3
USP11P51784 MIR4741-201ENST00000579822 90 ntBASIC16.9■□□□□ 0.3
USP11P51784 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.9■□□□□ 0.3
USP11P51784 AC244157.2-201ENST00000616239 1006 ntBASIC16.9■□□□□ 0.3
USP11P51784 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.9■□□□□ 0.3
USP11P51784 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP11P51784 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.9■□□□□ 0.3
USP11P51784 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP11P51784 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.9■□□□□ 0.3
USP11P51784 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.9■□□□□ 0.3
USP11P51784 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USP11P51784 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP11P51784 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.9■□□□□ 0.3
USP11P51784 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP11P51784 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.9■□□□□ 0.3
USP11P51784 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
USP11P51784 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.9■□□□□ 0.3
USP11P51784 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP11P51784 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP11P51784 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USP11P51784 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
USP11P51784 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
USP11P51784 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP11P51784 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP11P51784 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
USP11P51784 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.89■□□□□ 0.29
USP11P51784 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP11P51784 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP11P51784 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
USP11P51784 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP11P51784 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP11P51784 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
USP11P51784 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.89■□□□□ 0.29
USP11P51784 AC079178.1-201ENST00000420915 656 ntBASIC16.89■□□□□ 0.29
USP11P51784 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.89■□□□□ 0.29
USP11P51784 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
USP11P51784 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.89■□□□□ 0.29
USP11P51784 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.89■□□□□ 0.29
USP11P51784 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.89■□□□□ 0.29
USP11P51784 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.89■□□□□ 0.29
USP11P51784 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.89■□□□□ 0.29
USP11P51784 AC009542.2-202ENST00000619004 1067 ntBASIC16.89■□□□□ 0.29
USP11P51784 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP11P51784 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP11P51784 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
USP11P51784 AC015818.8-201ENST00000587907 1519 ntBASIC16.89■□□□□ 0.29
USP11P51784 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP11P51784 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms