Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.52■□□□□ 0.24
CDK7P50613 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CDK7P50613 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CDK7P50613 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.52■□□□□ 0.24
CDK7P50613 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CDK7P50613 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CDK7P50613 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDK7P50613 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDK7P50613 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDK7P50613 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDK7P50613 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CDK7P50613 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CDK7P50613 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.52■□□□□ 0.24
CDK7P50613 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.52■□□□□ 0.24
CDK7P50613 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDK7P50613 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.52■□□□□ 0.24
CDK7P50613 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.52■□□□□ 0.24
CDK7P50613 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDK7P50613 DNM1P30-201ENST00000563586 452 ntBASIC16.52■□□□□ 0.24
CDK7P50613 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.52■□□□□ 0.24
CDK7P50613 AC138894.2-201ENST00000602838 371 ntBASIC16.52■□□□□ 0.24
CDK7P50613 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.52■□□□□ 0.24
CDK7P50613 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDK7P50613 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDK7P50613 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.52■□□□□ 0.23
CDK7P50613 AC006058.4-201ENST00000624016 1670 ntBASIC16.52■□□□□ 0.23
CDK7P50613 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CDK7P50613 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDK7P50613 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDK7P50613 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDK7P50613 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CDK7P50613 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.52■□□□□ 0.23
CDK7P50613 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.51■□□□□ 0.23
CDK7P50613 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK7P50613 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK7P50613 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK7P50613 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CDK7P50613 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDK7P50613 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK7P50613 AC092127.1-201ENST00000567093 3455 ntBASIC16.51■□□□□ 0.23
CDK7P50613 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK7P50613 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK7P50613 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK7P50613 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDK7P50613 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.51■□□□□ 0.23
CDK7P50613 OR2K2-202ENST00000374428 1038 ntBASIC16.51■□□□□ 0.23
CDK7P50613 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK7P50613 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK7P50613 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.51■□□□□ 0.23
CDK7P50613 RN7SL8P-201ENST00000461771 266 ntBASIC16.51■□□□□ 0.23
CDK7P50613 RN7SL818P-201ENST00000485099 259 ntBASIC16.51■□□□□ 0.23
CDK7P50613 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC16.51■□□□□ 0.23
CDK7P50613 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK7P50613 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDK7P50613 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CDK7P50613 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.51■□□□□ 0.23
CDK7P50613 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.51■□□□□ 0.23
CDK7P50613 RN7SL725P-201ENST00000606439 259 ntBASIC16.51■□□□□ 0.23
CDK7P50613 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.51■□□□□ 0.23
CDK7P50613 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CDK7P50613 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.51■□□□□ 0.23
CDK7P50613 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.51■□□□□ 0.23
CDK7P50613 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.51■□□□□ 0.23
CDK7P50613 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.51■□□□□ 0.23
CDK7P50613 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.51■□□□□ 0.23
CDK7P50613 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK7P50613 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK7P50613 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CDK7P50613 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK7P50613 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK7P50613 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDK7P50613 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK7P50613 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK7P50613 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK7P50613 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK7P50613 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK7P50613 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.5■□□□□ 0.23
CDK7P50613 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.5■□□□□ 0.23
CDK7P50613 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
CDK7P50613 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CDK7P50613 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK7P50613 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK7P50613 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDK7P50613 AC136759.1-202ENST00000530858 2194 ntBASIC16.5■□□□□ 0.23
CDK7P50613 AC144831.1-201ENST00000573312 2656 ntBASIC16.5■□□□□ 0.23
CDK7P50613 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK7P50613 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK7P50613 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK7P50613 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK7P50613 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.5■□□□□ 0.23
CDK7P50613 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CDK7P50613 AC078875.1-201ENST00000431907 724 ntBASIC16.5■□□□□ 0.23
CDK7P50613 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.5■□□□□ 0.23
CDK7P50613 RPL13AP19-201ENST00000434320 584 ntBASIC16.5■□□□□ 0.23
CDK7P50613 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.5■□□□□ 0.23
CDK7P50613 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.5■□□□□ 0.23
CDK7P50613 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.5■□□□□ 0.23
CDK7P50613 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.5■□□□□ 0.23
CDK7P50613 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDK7P50613 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms