Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PRIM2P49643 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRIM2P49643 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.39□□□□□ -0.11
PRIM2P49643 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.39□□□□□ -0.11
PRIM2P49643 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.39□□□□□ -0.11
PRIM2P49643 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PRIM2P49643 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRIM2P49643 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRIM2P49643 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.39□□□□□ -0.11
PRIM2P49643 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRIM2P49643 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PRIM2P49643 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRIM2P49643 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PRIM2P49643 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.38□□□□□ -0.11
PRIM2P49643 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PRIM2P49643 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.38□□□□□ -0.11
PRIM2P49643 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.38□□□□□ -0.11
PRIM2P49643 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.38□□□□□ -0.11
PRIM2P49643 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.38□□□□□ -0.11
PRIM2P49643 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.38□□□□□ -0.11
PRIM2P49643 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PRIM2P49643 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PRIM2P49643 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.38□□□□□ -0.11
PRIM2P49643 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.38□□□□□ -0.11
PRIM2P49643 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.38□□□□□ -0.11
PRIM2P49643 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PRIM2P49643 SPDYE18-201ENST00000510091 1050 ntBASIC14.38□□□□□ -0.11
PRIM2P49643 RNA5SP421-201ENST00000516864 134 ntBASIC14.38□□□□□ -0.11
PRIM2P49643 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PRIM2P49643 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.38□□□□□ -0.11
PRIM2P49643 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.38□□□□□ -0.11
PRIM2P49643 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.38□□□□□ -0.11
PRIM2P49643 RARRES2P5-201ENST00000564013 466 ntBASIC14.38□□□□□ -0.11
PRIM2P49643 AC104794.3-201ENST00000566840 1248 ntBASIC14.38□□□□□ -0.11
PRIM2P49643 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.38□□□□□ -0.11
PRIM2P49643 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
PRIM2P49643 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.38□□□□□ -0.11
PRIM2P49643 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
PRIM2P49643 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.38□□□□□ -0.11
PRIM2P49643 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PRIM2P49643 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.38□□□□□ -0.11
PRIM2P49643 AC117489.1-201ENST00000625169 3217 ntBASIC14.37□□□□□ -0.11
PRIM2P49643 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRIM2P49643 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PRIM2P49643 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRIM2P49643 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PRIM2P49643 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRIM2P49643 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRIM2P49643 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRIM2P49643 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.37□□□□□ -0.11
PRIM2P49643 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PRIM2P49643 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRIM2P49643 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
PRIM2P49643 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRIM2P49643 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRIM2P49643 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRIM2P49643 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.37□□□□□ -0.11
PRIM2P49643 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRIM2P49643 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRIM2P49643 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.37□□□□□ -0.11
PRIM2P49643 MEP1AP4-201ENST00000423244 1087 ntBASIC14.37□□□□□ -0.11
PRIM2P49643 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.37□□□□□ -0.11
PRIM2P49643 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.37□□□□□ -0.11
PRIM2P49643 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.37□□□□□ -0.11
PRIM2P49643 AL589987.1-201ENST00000453380 819 ntBASIC14.37□□□□□ -0.11
PRIM2P49643 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.37□□□□□ -0.11
PRIM2P49643 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PRIM2P49643 AC004066.1-201ENST00000502488 802 ntBASIC14.37□□□□□ -0.11
PRIM2P49643 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.37□□□□□ -0.11
PRIM2P49643 DOC2GP-202ENST00000514950 1163 ntBASIC14.37□□□□□ -0.11
PRIM2P49643 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms