Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.67■□□□□ 0.26
TM4SF4P48230 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF4P48230 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.67■□□□□ 0.26
TM4SF4P48230 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF4P48230 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF4P48230 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.67■□□□□ 0.26
TM4SF4P48230 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF4P48230 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF4P48230 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF4P48230 AC090616.6-203ENST00000579186 1945 ntBASIC16.67■□□□□ 0.26
TM4SF4P48230 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TM4SF4P48230 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC16.67■□□□□ 0.26
TM4SF4P48230 AC006529.1-201ENST00000459978 637 ntBASIC16.67■□□□□ 0.26
TM4SF4P48230 RPS23-207ENST00000511844 530 ntTSL 2 BASIC16.67■□□□□ 0.26
TM4SF4P48230 AC095040.1-201ENST00000513286 675 ntBASIC16.67■□□□□ 0.26
TM4SF4P48230 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.67■□□□□ 0.26
TM4SF4P48230 MT2A-202ENST00000561491 581 ntTSL 2 BASIC16.67■□□□□ 0.26
TM4SF4P48230 AC004686.1-201ENST00000605113 538 ntBASIC16.67■□□□□ 0.26
TM4SF4P48230 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF4P48230 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF4P48230 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
TM4SF4P48230 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
TM4SF4P48230 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TM4SF4P48230 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.67■□□□□ 0.26
TM4SF4P48230 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.67■□□□□ 0.26
TM4SF4P48230 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF4P48230 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.67■□□□□ 0.26
TM4SF4P48230 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TM4SF4P48230 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF4P48230 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
TM4SF4P48230 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.66■□□□□ 0.26
TM4SF4P48230 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF4P48230 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF4P48230 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF4P48230 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF4P48230 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF4P48230 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF4P48230 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
TM4SF4P48230 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.66■□□□□ 0.26
TM4SF4P48230 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF4P48230 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF4P48230 CTSL-202ENST00000342020 933 ntTSL 2 BASIC16.66■□□□□ 0.26
TM4SF4P48230 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF4P48230 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF4P48230 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC16.66■□□□□ 0.26
TM4SF4P48230 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF4P48230 RNLS-203ENST00000437752 525 ntTSL 2 BASIC16.66■□□□□ 0.26
TM4SF4P48230 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC16.66■□□□□ 0.26
TM4SF4P48230 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC16.66■□□□□ 0.26
TM4SF4P48230 NAA40-205ENST00000539656 577 ntTSL 4 BASIC16.66■□□□□ 0.26
TM4SF4P48230 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF4P48230 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
TM4SF4P48230 NDUFB10P1-201ENST00000567319 521 ntBASIC16.66■□□□□ 0.26
TM4SF4P48230 SNORD3B-1-201ENST00000577988 758 ntBASIC16.66■□□□□ 0.26
TM4SF4P48230 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.66■□□□□ 0.26
TM4SF4P48230 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC16.66■□□□□ 0.26
TM4SF4P48230 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
TM4SF4P48230 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF4P48230 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF4P48230 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.66■□□□□ 0.26
TM4SF4P48230 AP000769.1-203ENST00000637245 208 ntBASIC16.66■□□□□ 0.26
TM4SF4P48230 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC16.66■□□□□ 0.26
TM4SF4P48230 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TM4SF4P48230 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TM4SF4P48230 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TM4SF4P48230 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.66■□□□□ 0.26
TM4SF4P48230 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TM4SF4P48230 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF4P48230 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TM4SF4P48230 AGGF1P1-201ENST00000509500 2073 ntBASIC16.66■□□□□ 0.26
TM4SF4P48230 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF4P48230 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.66■□□□□ 0.26
TM4SF4P48230 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF4P48230 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF4P48230 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TM4SF4P48230 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TM4SF4P48230 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TM4SF4P48230 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.65■□□□□ 0.26
TM4SF4P48230 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TM4SF4P48230 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TM4SF4P48230 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TM4SF4P48230 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TM4SF4P48230 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TM4SF4P48230 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TM4SF4P48230 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TM4SF4P48230 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TM4SF4P48230 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC16.65■□□□□ 0.26
TM4SF4P48230 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC16.65■□□□□ 0.26
TM4SF4P48230 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.65■□□□□ 0.26
TM4SF4P48230 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC16.65■□□□□ 0.26
TM4SF4P48230 CASP3-205ENST00000517513 964 ntTSL 5 BASIC16.65■□□□□ 0.26
TM4SF4P48230 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
TM4SF4P48230 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC16.65■□□□□ 0.26
TM4SF4P48230 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC16.65■□□□□ 0.26
TM4SF4P48230 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC16.65■□□□□ 0.26
TM4SF4P48230 GAS7-216ENST00000583882 553 ntTSL 5 BASIC16.65■□□□□ 0.26
TM4SF4P48230 RN7SL121P-201ENST00000584223 273 ntBASIC16.65■□□□□ 0.26
TM4SF4P48230 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC16.65■□□□□ 0.26
TM4SF4P48230 APOC1-209ENST00000592885 562 ntTSL 3 BASIC16.65■□□□□ 0.26
TM4SF4P48230 AL160191.2-201ENST00000603975 601 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms