Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.96■□□□□ 0.31
PRPHP41219 AC105233.6-201ENST00000642093 218 ntBASIC16.96■□□□□ 0.31
PRPHP41219 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRPHP41219 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.96■□□□□ 0.31
PRPHP41219 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.96■□□□□ 0.31
PRPHP41219 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRPHP41219 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRPHP41219 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.96■□□□□ 0.31
PRPHP41219 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRPHP41219 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRPHP41219 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.96■□□□□ 0.31
PRPHP41219 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PRPHP41219 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PRPHP41219 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PRPHP41219 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PRPHP41219 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PRPHP41219 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PRPHP41219 CLUHP2-201ENST00000426660 1303 ntBASIC16.96■□□□□ 0.3
PRPHP41219 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRPHP41219 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.95■□□□□ 0.3
PRPHP41219 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRPHP41219 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRPHP41219 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRPHP41219 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRPHP41219 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRPHP41219 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRPHP41219 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRPHP41219 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.95■□□□□ 0.3
PRPHP41219 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRPHP41219 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.95■□□□□ 0.3
PRPHP41219 RN7SKP230-201ENST00000365642 335 ntBASIC16.95■□□□□ 0.3
PRPHP41219 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
PRPHP41219 COX20P2-201ENST00000452636 358 ntBASIC16.95■□□□□ 0.3
PRPHP41219 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRPHP41219 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.95■□□□□ 0.3
PRPHP41219 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRPHP41219 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.95■□□□□ 0.3
PRPHP41219 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.95■□□□□ 0.3
PRPHP41219 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.95■□□□□ 0.3
PRPHP41219 BTNL10-201ENST00000595971 695 ntBASIC16.95■□□□□ 0.3
PRPHP41219 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.95■□□□□ 0.3
PRPHP41219 AC138466.3-201ENST00000619983 221 ntBASIC16.95■□□□□ 0.3
PRPHP41219 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRPHP41219 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRPHP41219 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
PRPHP41219 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRPHP41219 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRPHP41219 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRPHP41219 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRPHP41219 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
PRPHP41219 OR2I1P-210ENST00000642037 4691 ntBASIC16.95■□□□□ 0.3
PRPHP41219 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.95■□□□□ 0.3
PRPHP41219 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
PRPHP41219 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
PRPHP41219 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRPHP41219 AL354702.1-201ENST00000442006 1960 ntBASIC16.95■□□□□ 0.3
PRPHP41219 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRPHP41219 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRPHP41219 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRPHP41219 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRPHP41219 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRPHP41219 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRPHP41219 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
PRPHP41219 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.94■□□□□ 0.3
PRPHP41219 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRPHP41219 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
PRPHP41219 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.94■□□□□ 0.3
PRPHP41219 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
PRPHP41219 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PRPHP41219 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.94■□□□□ 0.3
PRPHP41219 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRPHP41219 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRPHP41219 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRPHP41219 TMEM14DP-201ENST00000422205 345 ntBASIC16.94■□□□□ 0.3
PRPHP41219 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PRPHP41219 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRPHP41219 TPT1P11-201ENST00000458482 498 ntBASIC16.94■□□□□ 0.3
PRPHP41219 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRPHP41219 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRPHP41219 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.94■□□□□ 0.3
PRPHP41219 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PRPHP41219 AC131206.1-201ENST00000538078 1211 ntBASIC16.94■□□□□ 0.3
PRPHP41219 CR383656.12-201ENST00000549567 513 ntBASIC16.94■□□□□ 0.3
PRPHP41219 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PRPHP41219 AL022328.1-201ENST00000610050 478 ntBASIC16.94■□□□□ 0.3
PRPHP41219 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.94■□□□□ 0.3
PRPHP41219 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.94■□□□□ 0.3
PRPHP41219 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.94■□□□□ 0.3
PRPHP41219 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRPHP41219 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRPHP41219 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRPHP41219 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.94■□□□□ 0.3
PRPHP41219 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.94■□□□□ 0.3
PRPHP41219 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRPHP41219 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PRPHP41219 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PRPHP41219 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRPHP41219 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
PRPHP41219 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRPHP41219 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms