Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6BP35913 AC092638.2-201ENST00000441105 947 ntBASIC18.28■□□□□ 0.52
PDE6BP35913 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC18.28■□□□□ 0.52
PDE6BP35913 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PDE6BP35913 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PDE6BP35913 ORAOV1P1-201ENST00000503108 395 ntBASIC18.28■□□□□ 0.52
PDE6BP35913 POLD4-208ENST00000532830 904 ntTSL 3 BASIC18.28■□□□□ 0.52
PDE6BP35913 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE6BP35913 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6BP35913 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6BP35913 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC18.28■□□□□ 0.52
PDE6BP35913 AC084781.1-201ENST00000613737 656 ntBASIC18.28■□□□□ 0.52
PDE6BP35913 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC18.28■□□□□ 0.52
PDE6BP35913 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6BP35913 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE6BP35913 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6BP35913 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE6BP35913 FAS-202ENST00000352159 1722 ntTSL 5 BASIC18.28■□□□□ 0.52
PDE6BP35913 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6BP35913 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.28■□□□□ 0.52
PDE6BP35913 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6BP35913 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6BP35913 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PDE6BP35913 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC18.28■□□□□ 0.52
PDE6BP35913 TMBIM7P-202ENST00000641474 1516 ntBASIC18.28■□□□□ 0.52
PDE6BP35913 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6BP35913 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6BP35913 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PDE6BP35913 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.27■□□□□ 0.52
PDE6BP35913 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.27■□□□□ 0.52
PDE6BP35913 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PDE6BP35913 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6BP35913 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6BP35913 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6BP35913 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6BP35913 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6BP35913 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6BP35913 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PDE6BP35913 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC18.27■□□□□ 0.52
PDE6BP35913 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6BP35913 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC18.27■□□□□ 0.52
PDE6BP35913 MRPL22P1-201ENST00000505398 616 ntBASIC18.27■□□□□ 0.52
PDE6BP35913 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC18.27■□□□□ 0.52
PDE6BP35913 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC18.27■□□□□ 0.52
PDE6BP35913 MVK-217ENST00000639206 367 ntTSL 5 BASIC18.27■□□□□ 0.52
PDE6BP35913 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
PDE6BP35913 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6BP35913 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6BP35913 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDE6BP35913 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
PDE6BP35913 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
PDE6BP35913 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
PDE6BP35913 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDE6BP35913 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDE6BP35913 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.27■□□□□ 0.51
PDE6BP35913 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PDE6BP35913 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDE6BP35913 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
PDE6BP35913 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDE6BP35913 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6BP35913 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6BP35913 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PDE6BP35913 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6BP35913 AC007292.2-201ENST00000593524 1812 ntBASIC18.26■□□□□ 0.51
PDE6BP35913 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.26■□□□□ 0.51
PDE6BP35913 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6BP35913 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PDE6BP35913 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PDE6BP35913 BAK1P1-201ENST00000317045 636 ntBASIC18.26■□□□□ 0.51
PDE6BP35913 AC234644.1-201ENST00000406065 370 ntBASIC18.26■□□□□ 0.51
PDE6BP35913 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC18.26■□□□□ 0.51
PDE6BP35913 RHEB-207ENST00000496004 744 ntTSL 2 BASIC18.26■□□□□ 0.51
PDE6BP35913 ALG1L6P-201ENST00000515248 758 ntBASIC18.26■□□□□ 0.51
PDE6BP35913 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PDE6BP35913 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6BP35913 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC18.26■□□□□ 0.51
PDE6BP35913 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC18.26■□□□□ 0.51
PDE6BP35913 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC18.26■□□□□ 0.51
PDE6BP35913 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6BP35913 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6BP35913 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.26■□□□□ 0.51
PDE6BP35913 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.26■□□□□ 0.51
PDE6BP35913 AC090502.4-201ENST00000551714 1386 ntBASIC18.26■□□□□ 0.51
PDE6BP35913 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC18.26■□□□□ 0.51
PDE6BP35913 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.26■□□□□ 0.51
PDE6BP35913 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6BP35913 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6BP35913 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6BP35913 AL118508.1-201ENST00000613502 2345 ntBASIC18.26■□□□□ 0.51
PDE6BP35913 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6BP35913 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.25■□□□□ 0.51
PDE6BP35913 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.25■□□□□ 0.51
PDE6BP35913 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6BP35913 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PDE6BP35913 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6BP35913 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PDE6BP35913 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PDE6BP35913 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
PDE6BP35913 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC18.25■□□□□ 0.51
PDE6BP35913 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms