Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.37□□□□□ -0.11
GPC1P35052 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.37□□□□□ -0.11
GPC1P35052 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC14.37□□□□□ -0.11
GPC1P35052 AC055876.2-201ENST00000531834 546 ntBASIC14.37□□□□□ -0.11
GPC1P35052 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.37□□□□□ -0.11
GPC1P35052 AC004790.1-201ENST00000612686 536 ntBASIC14.37□□□□□ -0.11
GPC1P35052 AC009118.2-201ENST00000613275 655 ntBASIC14.37□□□□□ -0.11
GPC1P35052 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.37□□□□□ -0.11
GPC1P35052 DRD5P1-201ENST00000456605 1438 ntBASIC14.37□□□□□ -0.11
GPC1P35052 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
GPC1P35052 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC1P35052 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC1P35052 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GPC1P35052 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
GPC1P35052 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
GPC1P35052 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GPC1P35052 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC1P35052 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC1P35052 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.37□□□□□ -0.11
GPC1P35052 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC1P35052 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.37□□□□□ -0.11
GPC1P35052 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
GPC1P35052 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.37□□□□□ -0.11
GPC1P35052 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GPC1P35052 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GPC1P35052 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.36□□□□□ -0.11
GPC1P35052 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 AL138799.1-201ENST00000448213 1675 ntBASIC14.36□□□□□ -0.11
GPC1P35052 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.36□□□□□ -0.11
GPC1P35052 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.36□□□□□ -0.11
GPC1P35052 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
GPC1P35052 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.36□□□□□ -0.11
GPC1P35052 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.36□□□□□ -0.11
GPC1P35052 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.36□□□□□ -0.11
GPC1P35052 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GPC1P35052 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.36□□□□□ -0.11
GPC1P35052 MIR770-201ENST00000390219 98 ntBASIC14.36□□□□□ -0.11
GPC1P35052 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.36□□□□□ -0.11
GPC1P35052 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.36□□□□□ -0.11
GPC1P35052 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.36□□□□□ -0.11
GPC1P35052 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.36□□□□□ -0.11
GPC1P35052 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.36□□□□□ -0.11
GPC1P35052 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.36□□□□□ -0.11
GPC1P35052 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.36□□□□□ -0.11
GPC1P35052 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.36□□□□□ -0.11
GPC1P35052 RRP7BP-205ENST00000566851 833 ntBASIC14.36□□□□□ -0.11
GPC1P35052 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.36□□□□□ -0.11
GPC1P35052 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.36□□□□□ -0.11
GPC1P35052 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.36□□□□□ -0.11
GPC1P35052 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
GPC1P35052 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.36□□□□□ -0.11
GPC1P35052 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 AL157414.3-201ENST00000624276 1954 ntBASIC14.36□□□□□ -0.11
GPC1P35052 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
GPC1P35052 AL360270.3-201ENST00000609118 1348 ntBASIC14.36□□□□□ -0.11
GPC1P35052 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.36□□□□□ -0.11
GPC1P35052 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
GPC1P35052 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC1P35052 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.36□□□□□ -0.11
GPC1P35052 AL390755.1-201ENST00000623716 2027 ntBASIC14.36□□□□□ -0.11
GPC1P35052 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.36□□□□□ -0.11
GPC1P35052 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GPC1P35052 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.35□□□□□ -0.11
GPC1P35052 AC232323.1-201ENST00000540724 2099 ntBASIC14.35□□□□□ -0.11
GPC1P35052 REXO1L5P-201ENST00000622260 2098 ntBASIC14.35□□□□□ -0.11
GPC1P35052 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
GPC1P35052 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC1P35052 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.35□□□□□ -0.11
GPC1P35052 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.35□□□□□ -0.11
GPC1P35052 DMBT1P1-203ENST00000636837 4628 ntBASIC14.35□□□□□ -0.11
GPC1P35052 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.35□□□□□ -0.11
GPC1P35052 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.35□□□□□ -0.11
GPC1P35052 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC1P35052 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC1P35052 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC1P35052 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms