Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
ABCD3P28288 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
ABCD3P28288 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
ABCD3P28288 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.87□□□□□ -0.19
ABCD3P28288 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
ABCD3P28288 CLUHP2-201ENST00000426660 1303 ntBASIC13.87□□□□□ -0.19
ABCD3P28288 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
ABCD3P28288 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.87□□□□□ -0.19
ABCD3P28288 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ABCD3P28288 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.86□□□□□ -0.19
ABCD3P28288 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.86□□□□□ -0.19
ABCD3P28288 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.86□□□□□ -0.19
ABCD3P28288 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.86□□□□□ -0.19
ABCD3P28288 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.86□□□□□ -0.19
ABCD3P28288 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ABCD3P28288 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.86□□□□□ -0.19
ABCD3P28288 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ABCD3P28288 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.86□□□□□ -0.19
ABCD3P28288 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ABCD3P28288 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
ABCD3P28288 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ABCD3P28288 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ABCD3P28288 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
ABCD3P28288 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ABCD3P28288 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ABCD3P28288 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ABCD3P28288 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ABCD3P28288 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ABCD3P28288 MIR658-201ENST00000385210 100 ntBASIC13.86□□□□□ -0.19
ABCD3P28288 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
ABCD3P28288 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ABCD3P28288 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.86□□□□□ -0.19
ABCD3P28288 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.86□□□□□ -0.19
ABCD3P28288 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ABCD3P28288 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.86□□□□□ -0.19
ABCD3P28288 MESTP3-201ENST00000503460 968 ntBASIC13.86□□□□□ -0.19
ABCD3P28288 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
ABCD3P28288 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.86□□□□□ -0.19
ABCD3P28288 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.86□□□□□ -0.19
ABCD3P28288 AC079316.1-201ENST00000548397 411 ntBASIC13.86□□□□□ -0.19
ABCD3P28288 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.86□□□□□ -0.19
ABCD3P28288 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.86□□□□□ -0.19
ABCD3P28288 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.86□□□□□ -0.19
ABCD3P28288 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ABCD3P28288 AC138466.3-201ENST00000619983 221 ntBASIC13.86□□□□□ -0.19
ABCD3P28288 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.86□□□□□ -0.19
ABCD3P28288 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ABCD3P28288 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
ABCD3P28288 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ABCD3P28288 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ABCD3P28288 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ABCD3P28288 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
ABCD3P28288 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ABCD3P28288 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ABCD3P28288 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ABCD3P28288 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ABCD3P28288 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ABCD3P28288 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ABCD3P28288 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.85□□□□□ -0.19
ABCD3P28288 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 AL354989.2-201ENST00000435838 1540 ntBASIC13.85□□□□□ -0.19
ABCD3P28288 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
ABCD3P28288 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 AC126755.1-201ENST00000525846 6405 ntBASIC13.85□□□□□ -0.19
ABCD3P28288 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.85□□□□□ -0.19
ABCD3P28288 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.85□□□□□ -0.19
ABCD3P28288 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.85□□□□□ -0.19
ABCD3P28288 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.85□□□□□ -0.19
ABCD3P28288 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ABCD3P28288 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms