Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.63□□□□□ -0.23
GDF1P27539 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
GDF1P27539 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GDF1P27539 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
GDF1P27539 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GDF1P27539 AC022532.1-201ENST00000624563 1728 ntBASIC13.63□□□□□ -0.23
GDF1P27539 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.63□□□□□ -0.23
GDF1P27539 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDF1P27539 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDF1P27539 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDF1P27539 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDF1P27539 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDF1P27539 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
GDF1P27539 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.63□□□□□ -0.23
GDF1P27539 LINC00554-201ENST00000564841 3011 ntBASIC13.63□□□□□ -0.23
GDF1P27539 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
GDF1P27539 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
GDF1P27539 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDF1P27539 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
GDF1P27539 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
GDF1P27539 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
GDF1P27539 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.63□□□□□ -0.23
GDF1P27539 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDF1P27539 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.62□□□□□ -0.23
GDF1P27539 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.62□□□□□ -0.23
GDF1P27539 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.62□□□□□ -0.23
GDF1P27539 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.62□□□□□ -0.23
GDF1P27539 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.62□□□□□ -0.23
GDF1P27539 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 AP002414.2-201ENST00000591780 3365 ntBASIC13.62□□□□□ -0.23
GDF1P27539 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.62□□□□□ -0.23
GDF1P27539 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.62□□□□□ -0.23
GDF1P27539 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
GDF1P27539 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 AC079178.1-201ENST00000420915 656 ntBASIC13.62□□□□□ -0.23
GDF1P27539 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.62□□□□□ -0.23
GDF1P27539 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.62□□□□□ -0.23
GDF1P27539 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.62□□□□□ -0.23
GDF1P27539 MIR4525-201ENST00000580000 75 ntBASIC13.62□□□□□ -0.23
GDF1P27539 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.62□□□□□ -0.23
GDF1P27539 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.62□□□□□ -0.23
GDF1P27539 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 AC015818.8-201ENST00000587907 1519 ntBASIC13.62□□□□□ -0.23
GDF1P27539 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.62□□□□□ -0.23
GDF1P27539 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
GDF1P27539 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
GDF1P27539 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.62□□□□□ -0.23
GDF1P27539 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
GDF1P27539 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
GDF1P27539 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.62□□□□□ -0.23
GDF1P27539 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
GDF1P27539 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.62□□□□□ -0.23
GDF1P27539 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
GDF1P27539 AC013268.4-201ENST00000637413 2228 ntBASIC13.62□□□□□ -0.23
GDF1P27539 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GDF1P27539 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.61□□□□□ -0.23
GDF1P27539 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.61□□□□□ -0.23
GDF1P27539 AL023775.1-201ENST00000454907 1746 ntBASIC13.61□□□□□ -0.23
GDF1P27539 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GDF1P27539 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDF1P27539 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.61□□□□□ -0.23
GDF1P27539 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDF1P27539 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.61□□□□□ -0.23
GDF1P27539 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDF1P27539 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDF1P27539 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.61□□□□□ -0.23
GDF1P27539 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
GDF1P27539 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.61□□□□□ -0.23
GDF1P27539 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GDF1P27539 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.61□□□□□ -0.23
GDF1P27539 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms