Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LAMA1P25391 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LAMA1P25391 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LAMA1P25391 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LAMA1P25391 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LAMA1P25391 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LAMA1P25391 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LAMA1P25391 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LAMA1P25391 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LAMA1P25391 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LAMA1P25391 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LAMA1P25391 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.31□□□□□ -0.12
LAMA1P25391 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LAMA1P25391 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LAMA1P25391 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LAMA1P25391 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LAMA1P25391 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LAMA1P25391 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.31□□□□□ -0.12
LAMA1P25391 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LAMA1P25391 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LAMA1P25391 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC14.3□□□□□ -0.12
LAMA1P25391 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC14.3□□□□□ -0.12
LAMA1P25391 RN7SL665P-201ENST00000578793 300 ntBASIC14.3□□□□□ -0.12
LAMA1P25391 RN7SL470P-201ENST00000583069 259 ntBASIC14.3□□□□□ -0.12
LAMA1P25391 MIR3188-201ENST00000583494 85 ntBASIC14.3□□□□□ -0.12
LAMA1P25391 HMGB1P24-201ENST00000611897 328 ntBASIC14.3□□□□□ -0.12
LAMA1P25391 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LAMA1P25391 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LAMA1P25391 LILRP1-201ENST00000444199 1370 ntBASIC14.3□□□□□ -0.12
LAMA1P25391 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 AC139749.1-202ENST00000617529 3139 ntBASIC14.3□□□□□ -0.12
LAMA1P25391 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LAMA1P25391 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC14.3□□□□□ -0.12
LAMA1P25391 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC14.3□□□□□ -0.12
LAMA1P25391 AC006548.2-201ENST00000605217 529 ntBASIC14.3□□□□□ -0.12
LAMA1P25391 AC092299.1-201ENST00000632679 757 ntBASIC14.3□□□□□ -0.12
LAMA1P25391 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.3□□□□□ -0.12
LAMA1P25391 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LAMA1P25391 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
LAMA1P25391 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 AC012508.2-201ENST00000567613 1472 ntBASIC14.3□□□□□ -0.12
LAMA1P25391 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
LAMA1P25391 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LAMA1P25391 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LAMA1P25391 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.3□□□□□ -0.12
LAMA1P25391 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 CICP6-201ENST00000457191 2729 ntBASIC14.3□□□□□ -0.12
LAMA1P25391 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.3□□□□□ -0.12
LAMA1P25391 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
LAMA1P25391 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LAMA1P25391 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.29□□□□□ -0.12
LAMA1P25391 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.29□□□□□ -0.12
LAMA1P25391 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.29□□□□□ -0.12
LAMA1P25391 AC013268.4-201ENST00000637413 2228 ntBASIC14.29□□□□□ -0.12
LAMA1P25391 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
LAMA1P25391 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LAMA1P25391 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LAMA1P25391 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LAMA1P25391 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LAMA1P25391 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC14.29□□□□□ -0.12
LAMA1P25391 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.29□□□□□ -0.12
LAMA1P25391 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LAMA1P25391 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC14.29□□□□□ -0.12
LAMA1P25391 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.29□□□□□ -0.12
LAMA1P25391 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.29□□□□□ -0.12
LAMA1P25391 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC14.29□□□□□ -0.12
LAMA1P25391 AC087392.5-201ENST00000612517 489 ntBASIC14.29□□□□□ -0.12
LAMA1P25391 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.29□□□□□ -0.12
LAMA1P25391 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LAMA1P25391 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LAMA1P25391 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LAMA1P25391 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LAMA1P25391 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.29□□□□□ -0.12
LAMA1P25391 AP002353.1-201ENST00000528257 1599 ntBASIC14.29□□□□□ -0.12
LAMA1P25391 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LAMA1P25391 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LAMA1P25391 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LAMA1P25391 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LAMA1P25391 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms