Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.2■□□□□ 0.02
VCLP18206 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
VCLP18206 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VCLP18206 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VCLP18206 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
VCLP18206 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VCLP18206 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.2■□□□□ 0.02
VCLP18206 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VCLP18206 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
VCLP18206 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VCLP18206 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VCLP18206 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.2■□□□□ 0.02
VCLP18206 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VCLP18206 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.2■□□□□ 0.02
VCLP18206 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VCLP18206 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.2■□□□□ 0.02
VCLP18206 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VCLP18206 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VCLP18206 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
VCLP18206 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
VCLP18206 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VCLP18206 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
VCLP18206 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VCLP18206 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VCLP18206 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
VCLP18206 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VCLP18206 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
VCLP18206 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VCLP18206 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.19■□□□□ 0.02
VCLP18206 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VCLP18206 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VCLP18206 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.19■□□□□ 0.02
VCLP18206 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.19■□□□□ 0.02
VCLP18206 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VCLP18206 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
VCLP18206 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VCLP18206 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
VCLP18206 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VCLP18206 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.19■□□□□ 0.02
VCLP18206 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.19■□□□□ 0.02
VCLP18206 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
VCLP18206 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.19■□□□□ 0.02
VCLP18206 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
VCLP18206 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.19■□□□□ 0.02
VCLP18206 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.19■□□□□ 0.02
VCLP18206 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VCLP18206 RN7SL837P-201ENST00000463010 287 ntBASIC15.19■□□□□ 0.02
VCLP18206 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.19■□□□□ 0.02
VCLP18206 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.19■□□□□ 0.02
VCLP18206 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.19■□□□□ 0.02
VCLP18206 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VCLP18206 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VCLP18206 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.19■□□□□ 0.02
VCLP18206 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.19■□□□□ 0.02
VCLP18206 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.19■□□□□ 0.02
VCLP18206 AL645728.2-202ENST00000641679 227 ntBASIC15.19■□□□□ 0.02
VCLP18206 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VCLP18206 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VCLP18206 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.19■□□□□ 0.02
VCLP18206 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.19■□□□□ 0.02
VCLP18206 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.19■□□□□ 0.02
VCLP18206 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VCLP18206 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VCLP18206 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VCLP18206 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VCLP18206 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.19■□□□□ 0.02
VCLP18206 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VCLP18206 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.19■□□□□ 0.02
VCLP18206 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VCLP18206 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VCLP18206 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VCLP18206 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
VCLP18206 AC140479.7-201ENST00000636301 2332 ntBASIC15.18■□□□□ 0.02
VCLP18206 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.18■□□□□ 0.02
VCLP18206 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.18■□□□□ 0.02
VCLP18206 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
VCLP18206 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VCLP18206 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.18■□□□□ 0.02
VCLP18206 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VCLP18206 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
VCLP18206 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VCLP18206 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VCLP18206 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.18■□□□□ 0.02
VCLP18206 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VCLP18206 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VCLP18206 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VCLP18206 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
VCLP18206 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.18■□□□□ 0.02
VCLP18206 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
VCLP18206 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.18■□□□□ 0.02
VCLP18206 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.18■□□□□ 0.02
VCLP18206 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.18■□□□□ 0.02
VCLP18206 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.18■□□□□ 0.02
VCLP18206 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.18■□□□□ 0.02
VCLP18206 AP001063.1-201ENST00000568332 529 ntBASIC15.18■□□□□ 0.02
VCLP18206 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.18■□□□□ 0.02
VCLP18206 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.18■□□□□ 0.02
VCLP18206 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.18■□□□□ 0.02
VCLP18206 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.18■□□□□ 0.02
VCLP18206 AC010319.3-201ENST00000597028 470 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms