Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL3L1P16619 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.43□□□□□ -0.42
CCL3L1P16619 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL3L1P16619 KRT43P-201ENST00000434019 910 ntBASIC12.43□□□□□ -0.42
CCL3L1P16619 C2orf27AP3-201ENST00000434123 579 ntBASIC12.43□□□□□ -0.42
CCL3L1P16619 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.43□□□□□ -0.42
CCL3L1P16619 U91328.1-201ENST00000437528 223 ntBASIC12.43□□□□□ -0.42
CCL3L1P16619 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCL3L1P16619 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL3L1P16619 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.43□□□□□ -0.42
CCL3L1P16619 AL590640.2-201ENST00000457038 527 ntBASIC12.43□□□□□ -0.42
CCL3L1P16619 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.43□□□□□ -0.42
CCL3L1P16619 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.43□□□□□ -0.42
CCL3L1P16619 AC025279.2-201ENST00000569730 653 ntBASIC12.43□□□□□ -0.42
CCL3L1P16619 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL3L1P16619 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
CCL3L1P16619 AL354718.3-201ENST00000616414 581 ntBASIC12.43□□□□□ -0.42
CCL3L1P16619 CR382287.1-201ENST00000623954 586 ntBASIC12.43□□□□□ -0.42
CCL3L1P16619 AC015656.1-201ENST00000624209 3578 ntBASIC12.43□□□□□ -0.42
CCL3L1P16619 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL3L1P16619 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
CCL3L1P16619 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCL3L1P16619 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL3L1P16619 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.43□□□□□ -0.42
CCL3L1P16619 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL3L1P16619 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CCL3L1P16619 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL3L1P16619 CICP14-201ENST00000629111 2732 ntBASIC12.43□□□□□ -0.42
CCL3L1P16619 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL3L1P16619 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CCL3L1P16619 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.43□□□□□ -0.42
CCL3L1P16619 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
CCL3L1P16619 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL3L1P16619 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CCL3L1P16619 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCL3L1P16619 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCL3L1P16619 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CCL3L1P16619 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL3L1P16619 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CCL3L1P16619 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL3L1P16619 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
CCL3L1P16619 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL3L1P16619 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL3L1P16619 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CCL3L1P16619 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CCL3L1P16619 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.42□□□□□ -0.42
CCL3L1P16619 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL3L1P16619 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.42□□□□□ -0.42
CCL3L1P16619 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL3L1P16619 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL3L1P16619 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CCL3L1P16619 AC007551.1-201ENST00000457394 519 ntBASIC12.42□□□□□ -0.42
CCL3L1P16619 KRT17P8-201ENST00000540749 863 ntBASIC12.42□□□□□ -0.42
CCL3L1P16619 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.42□□□□□ -0.42
CCL3L1P16619 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL3L1P16619 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL3L1P16619 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.42□□□□□ -0.42
CCL3L1P16619 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.42□□□□□ -0.42
CCL3L1P16619 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL3L1P16619 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 ECM1P1-201ENST00000604092 1279 ntBASIC12.42□□□□□ -0.42
CCL3L1P16619 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.42□□□□□ -0.42
CCL3L1P16619 AL603764.1-201ENST00000636452 321 ntBASIC12.42□□□□□ -0.42
CCL3L1P16619 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL3L1P16619 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CCL3L1P16619 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL3L1P16619 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL3L1P16619 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCL3L1P16619 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL3L1P16619 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CCL3L1P16619 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CCL3L1P16619 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL3L1P16619 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms