Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BMP3P12645 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
BMP3P12645 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
BMP3P12645 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.21■□□□□ 0.35
BMP3P12645 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
BMP3P12645 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
BMP3P12645 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
BMP3P12645 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.21■□□□□ 0.35
BMP3P12645 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.21■□□□□ 0.35
BMP3P12645 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.21■□□□□ 0.35
BMP3P12645 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BMP3P12645 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BMP3P12645 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.21■□□□□ 0.35
BMP3P12645 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
BMP3P12645 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
BMP3P12645 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BMP3P12645 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BMP3P12645 CYP46A4P-201ENST00000414953 267 ntBASIC17.21■□□□□ 0.35
BMP3P12645 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.21■□□□□ 0.35
BMP3P12645 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.21■□□□□ 0.35
BMP3P12645 AC012441.2-201ENST00000444843 739 ntBASIC17.21■□□□□ 0.35
BMP3P12645 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.21■□□□□ 0.35
BMP3P12645 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.21■□□□□ 0.35
BMP3P12645 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
BMP3P12645 AC090164.2-201ENST00000611487 516 ntBASIC17.21■□□□□ 0.35
BMP3P12645 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BMP3P12645 AL021578.1-201ENST00000613646 709 ntBASIC17.21■□□□□ 0.35
BMP3P12645 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.21■□□□□ 0.35
BMP3P12645 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
BMP3P12645 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BMP3P12645 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.21■□□□□ 0.35
BMP3P12645 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BMP3P12645 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.21■□□□□ 0.35
BMP3P12645 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.21■□□□□ 0.35
BMP3P12645 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BMP3P12645 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BMP3P12645 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
BMP3P12645 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.21■□□□□ 0.35
BMP3P12645 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BMP3P12645 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BMP3P12645 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
BMP3P12645 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.21■□□□□ 0.34
BMP3P12645 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
BMP3P12645 AL008718.2-201ENST00000609206 1313 ntBASIC17.21■□□□□ 0.34
BMP3P12645 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.2■□□□□ 0.34
BMP3P12645 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BMP3P12645 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
BMP3P12645 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
BMP3P12645 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.2■□□□□ 0.34
BMP3P12645 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.2■□□□□ 0.34
BMP3P12645 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BMP3P12645 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
BMP3P12645 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BMP3P12645 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BMP3P12645 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BMP3P12645 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.2■□□□□ 0.34
BMP3P12645 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.2■□□□□ 0.34
BMP3P12645 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BMP3P12645 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
BMP3P12645 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BMP3P12645 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.2■□□□□ 0.34
BMP3P12645 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BMP3P12645 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BMP3P12645 AL008707.1-201ENST00000422498 534 ntBASIC17.2■□□□□ 0.34
BMP3P12645 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BMP3P12645 SPTLC1P5-201ENST00000450718 252 ntBASIC17.2■□□□□ 0.34
BMP3P12645 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.2■□□□□ 0.34
BMP3P12645 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.2■□□□□ 0.34
BMP3P12645 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.2■□□□□ 0.34
BMP3P12645 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
BMP3P12645 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.2■□□□□ 0.34
BMP3P12645 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
BMP3P12645 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BMP3P12645 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BMP3P12645 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.2■□□□□ 0.34
BMP3P12645 AL136295.7-201ENST00000619226 1200 ntBASIC17.2■□□□□ 0.34
BMP3P12645 AC068587.10-201ENST00000641210 219 ntBASIC17.2■□□□□ 0.34
BMP3P12645 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BMP3P12645 AGAP7P-201ENST00000582299 2062 ntBASIC17.2■□□□□ 0.34
BMP3P12645 AGAP14-201ENST00000624701 2060 ntBASIC17.2■□□□□ 0.34
BMP3P12645 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.2■□□□□ 0.34
BMP3P12645 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BMP3P12645 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BMP3P12645 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.2■□□□□ 0.34
BMP3P12645 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
BMP3P12645 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BMP3P12645 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.2■□□□□ 0.34
BMP3P12645 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
BMP3P12645 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
BMP3P12645 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
BMP3P12645 FER1L4-210ENST00000615531 5998 ntBASIC17.19■□□□□ 0.34
BMP3P12645 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BMP3P12645 AC013726.1-201ENST00000563747 2285 ntBASIC17.19■□□□□ 0.34
BMP3P12645 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BMP3P12645 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.19■□□□□ 0.34
BMP3P12645 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.19■□□□□ 0.34
BMP3P12645 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BMP3P12645 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BMP3P12645 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BMP3P12645 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms