Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC11.78□□□□□ -0.52
CD28P10747 NEU3-202ENST00000526068 431 ntTSL 2 BASIC11.78□□□□□ -0.52
CD28P10747 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC11.78□□□□□ -0.52
CD28P10747 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC11.78□□□□□ -0.52
CD28P10747 AC004466.1-201ENST00000599515 1080 ntBASIC11.78□□□□□ -0.52
CD28P10747 KC6-205ENST00000599934 556 ntTSL 4 BASIC11.78□□□□□ -0.52
CD28P10747 AL451050.2-201ENST00000606967 682 ntBASIC11.78□□□□□ -0.52
CD28P10747 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC11.78□□□□□ -0.52
CD28P10747 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CD28P10747 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 CICP11-201ENST00000434745 2827 ntBASIC11.78□□□□□ -0.52
CD28P10747 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CD28P10747 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC11.78□□□□□ -0.52
CD28P10747 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CD28P10747 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CD28P10747 AP005117.1-202ENST00000581724 1908 ntBASIC11.78□□□□□ -0.52
CD28P10747 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD28P10747 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CD28P10747 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC11.78□□□□□ -0.52
CD28P10747 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC11.78□□□□□ -0.52
CD28P10747 AL157414.3-201ENST00000624276 1954 ntBASIC11.78□□□□□ -0.52
CD28P10747 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
CD28P10747 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
CD28P10747 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC11.77□□□□□ -0.52
CD28P10747 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CD28P10747 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
CD28P10747 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
CD28P10747 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CD28P10747 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
CD28P10747 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC11.77□□□□□ -0.52
CD28P10747 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CD28P10747 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CD28P10747 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.77□□□□□ -0.52
CD28P10747 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.77□□□□□ -0.52
CD28P10747 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
CD28P10747 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CD28P10747 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
CD28P10747 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CD28P10747 AC092850.2-201ENST00000623821 2697 ntBASIC11.77□□□□□ -0.52
CD28P10747 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CD28P10747 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC11.77□□□□□ -0.52
CD28P10747 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
CD28P10747 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
CD28P10747 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CD28P10747 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CD28P10747 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CD28P10747 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC11.77□□□□□ -0.52
CD28P10747 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CD28P10747 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
CD28P10747 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
CD28P10747 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD28P10747 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD28P10747 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
CD28P10747 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC11.77□□□□□ -0.53
CD28P10747 POM121L10P-201ENST00000436994 1285 ntBASIC11.77□□□□□ -0.53
CD28P10747 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC11.77□□□□□ -0.53
CD28P10747 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC11.77□□□□□ -0.53
CD28P10747 AC091804.1-201ENST00000486888 567 ntBASIC11.77□□□□□ -0.53
CD28P10747 SCARNA20.5-201ENST00000516991 142 ntBASIC11.77□□□□□ -0.53
CD28P10747 AP003171.2-201ENST00000528208 925 ntBASIC11.77□□□□□ -0.53
CD28P10747 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
CD28P10747 AC106820.3-201ENST00000561653 397 ntBASIC11.77□□□□□ -0.53
CD28P10747 NKG7-204ENST00000595217 816 ntTSL 2 BASIC11.77□□□□□ -0.53
CD28P10747 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC11.77□□□□□ -0.53
CD28P10747 AC007663.3-201ENST00000609632 465 ntBASIC11.77□□□□□ -0.53
CD28P10747 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC11.77□□□□□ -0.53
CD28P10747 ZACNP1-201ENST00000612259 710 ntBASIC11.77□□□□□ -0.53
CD28P10747 AL021578.1-201ENST00000613646 709 ntBASIC11.77□□□□□ -0.53
CD28P10747 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC11.77□□□□□ -0.53
CD28P10747 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
CD28P10747 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC11.77□□□□□ -0.53
CD28P10747 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD28P10747 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC11.77□□□□□ -0.53
CD28P10747 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
CD28P10747 CLUHP2-201ENST00000426660 1303 ntBASIC11.77□□□□□ -0.53
CD28P10747 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CD28P10747 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD28P10747 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CD28P10747 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD28P10747 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CD28P10747 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC11.77□□□□□ -0.53
CD28P10747 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC11.77□□□□□ -0.53
CD28P10747 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC11.77□□□□□ -0.53
CD28P10747 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC11.76□□□□□ -0.53
CD28P10747 AC138028.6-201ENST00000616106 1482 ntBASIC11.76□□□□□ -0.53
CD28P10747 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD28P10747 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms