Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.55■□□□□ 0.08
CD48P09326 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.55■□□□□ 0.08
CD48P09326 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.55■□□□□ 0.08
CD48P09326 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.55■□□□□ 0.08
CD48P09326 AC145423.3-201ENST00000615987 467 ntBASIC15.55■□□□□ 0.08
CD48P09326 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CD48P09326 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.55■□□□□ 0.08
CD48P09326 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.55■□□□□ 0.08
CD48P09326 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CD48P09326 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
CD48P09326 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CD48P09326 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CD48P09326 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.55■□□□□ 0.08
CD48P09326 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CD48P09326 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CD48P09326 SALL4P5-201ENST00000419001 1760 ntBASIC15.54■□□□□ 0.08
CD48P09326 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CD48P09326 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.54■□□□□ 0.08
CD48P09326 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.54■□□□□ 0.08
CD48P09326 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CD48P09326 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CD48P09326 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CD48P09326 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD48P09326 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CD48P09326 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD48P09326 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD48P09326 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.54■□□□□ 0.08
CD48P09326 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD48P09326 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD48P09326 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CD48P09326 AC015802.1-201ENST00000588104 1449 ntBASIC15.54■□□□□ 0.08
CD48P09326 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CD48P09326 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD48P09326 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD48P09326 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CD48P09326 AC134312.5-201ENST00000568031 1313 ntBASIC15.54■□□□□ 0.08
CD48P09326 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD48P09326 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD48P09326 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD48P09326 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD48P09326 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CD48P09326 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CD48P09326 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CD48P09326 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.54■□□□□ 0.08
CD48P09326 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.54■□□□□ 0.08
CD48P09326 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CD48P09326 BAATP1-201ENST00000412284 1225 ntBASIC15.54■□□□□ 0.08
CD48P09326 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.54■□□□□ 0.08
CD48P09326 ACTG1P3-201ENST00000431775 1114 ntBASIC15.54■□□□□ 0.08
CD48P09326 AC012441.1-201ENST00000446669 685 ntBASIC15.54■□□□□ 0.08
CD48P09326 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.54■□□□□ 0.08
CD48P09326 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CD48P09326 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.54■□□□□ 0.08
CD48P09326 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.54■□□□□ 0.08
CD48P09326 TDH-203ENST00000531764 1110 ntBASIC15.54■□□□□ 0.08
CD48P09326 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.54■□□□□ 0.08
CD48P09326 AC009486.1-201ENST00000569860 813 ntBASIC15.54■□□□□ 0.08
CD48P09326 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.54■□□□□ 0.08
CD48P09326 AC025048.6-201ENST00000634326 1161 ntBASIC15.54■□□□□ 0.08
CD48P09326 AL603764.1-201ENST00000636452 321 ntBASIC15.54■□□□□ 0.08
CD48P09326 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
CD48P09326 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
CD48P09326 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD48P09326 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CD48P09326 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD48P09326 INE2-201ENST00000630399 1874 ntBASIC15.54■□□□□ 0.08
CD48P09326 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD48P09326 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD48P09326 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.54■□□□□ 0.08
CD48P09326 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CD48P09326 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CD48P09326 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CD48P09326 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CD48P09326 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.53■□□□□ 0.08
CD48P09326 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CD48P09326 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.53■□□□□ 0.08
CD48P09326 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 AP006294.1-201ENST00000415407 339 ntBASIC15.53■□□□□ 0.08
CD48P09326 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms