Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
P04436 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P04436 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04436 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.72□□□□□ -0.21
P04436 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P04436 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P04436 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04436 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P04436 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
P04436 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P04436 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.72□□□□□ -0.21
P04436 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P04436 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04436 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P04436 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04436 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.72□□□□□ -0.21
P04436 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
P04436 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.72□□□□□ -0.21
P04436 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.72□□□□□ -0.21
P04436 AC007969.1-201ENST00000433675 447 ntBASIC13.72□□□□□ -0.21
P04436 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
P04436 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.72□□□□□ -0.21
P04436 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
P04436 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.72□□□□□ -0.21
P04436 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.72□□□□□ -0.21
P04436 MIR4538-201ENST00000581377 78 ntBASIC13.72□□□□□ -0.21
P04436 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.72□□□□□ -0.21
P04436 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.72□□□□□ -0.21
P04436 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
P04436 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P04436 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.72□□□□□ -0.21
P04436 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P04436 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.72□□□□□ -0.21
P04436 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
P04436 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P04436 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04436 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04436 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
P04436 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04436 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.72□□□□□ -0.21
P04436 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04436 AL023775.1-201ENST00000454907 1746 ntBASIC13.72□□□□□ -0.21
P04436 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.72□□□□□ -0.21
P04436 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
P04436 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.72□□□□□ -0.21
P04436 AP000593.2-201ENST00000542775 1433 ntBASIC13.72□□□□□ -0.21
P04436 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04436 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
P04436 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
P04436 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04436 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P04436 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P04436 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04436 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
P04436 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04436 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04436 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
P04436 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.71□□□□□ -0.21
P04436 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04436 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.71□□□□□ -0.21
P04436 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.71□□□□□ -0.21
P04436 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
P04436 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
P04436 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04436 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04436 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04436 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
P04436 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04436 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
P04436 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.71□□□□□ -0.21
P04436 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.71□□□□□ -0.21
P04436 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04436 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04436 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.71□□□□□ -0.21
P04436 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04436 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
P04436 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
P04436 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.71□□□□□ -0.21
P04436 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
P04436 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
P04436 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
P04436 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
P04436 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
P04436 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
P04436 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.71□□□□□ -0.21
P04436 MIR4525-201ENST00000580000 75 ntBASIC13.71□□□□□ -0.21
P04436 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.71□□□□□ -0.21
P04436 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04436 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.71□□□□□ -0.21
P04436 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P04436 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
P04436 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
P04436 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
P04436 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.71□□□□□ -0.22
P04436 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04436 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
P04436 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04436 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04436 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P04436 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms