Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC9.02□□□□□ -0.97
APOBP04114 KRT8P1-201ENST00000557533 1207 ntBASIC9.02□□□□□ -0.97
APOBP04114 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC9.02□□□□□ -0.97
APOBP04114 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC9.02□□□□□ -0.97
APOBP04114 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
APOBP04114 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC9.02□□□□□ -0.97
APOBP04114 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 PCDHGB8P-201ENST00000502926 1973 ntBASIC9.02□□□□□ -0.97
APOBP04114 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC9.02□□□□□ -0.97
APOBP04114 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 KRT8P43-201ENST00000406052 1458 ntBASIC9.02□□□□□ -0.97
APOBP04114 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
APOBP04114 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
APOBP04114 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
APOBP04114 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC9.02□□□□□ -0.97
APOBP04114 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC9.02□□□□□ -0.97
APOBP04114 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
APOBP04114 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
APOBP04114 IFNWP2-201ENST00000431203 580 ntBASIC9.02□□□□□ -0.97
APOBP04114 RPL3P5-201ENST00000441645 1232 ntBASIC9.02□□□□□ -0.97
APOBP04114 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC9.02□□□□□ -0.97
APOBP04114 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC9.02□□□□□ -0.97
APOBP04114 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC9.02□□□□□ -0.97
APOBP04114 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
APOBP04114 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC9.02□□□□□ -0.97
APOBP04114 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC9.02□□□□□ -0.97
APOBP04114 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC9.02□□□□□ -0.97
APOBP04114 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
APOBP04114 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 AC103563.1-201ENST00000429316 123 ntBASIC9.02□□□□□ -0.97
APOBP04114 AC025594.1-201ENST00000469533 543 ntBASIC9.02□□□□□ -0.97
APOBP04114 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC9.02□□□□□ -0.97
APOBP04114 APOC1-209ENST00000592885 562 ntTSL 3 BASIC9.02□□□□□ -0.97
APOBP04114 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
APOBP04114 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
APOBP04114 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
APOBP04114 LAP3P2-201ENST00000454686 1454 ntBASIC9.01□□□□□ -0.97
APOBP04114 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
APOBP04114 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
APOBP04114 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC9.01□□□□□ -0.97
APOBP04114 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
APOBP04114 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
APOBP04114 OR7E115P-201ENST00000382617 1024 ntBASIC9.01□□□□□ -0.97
APOBP04114 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
APOBP04114 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC9.01□□□□□ -0.97
APOBP04114 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC9.01□□□□□ -0.97
APOBP04114 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC9.01□□□□□ -0.97
APOBP04114 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC9.01□□□□□ -0.97
APOBP04114 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC9.01□□□□□ -0.97
APOBP04114 AC006986.1-201ENST00000612764 241 ntBASIC9.01□□□□□ -0.97
APOBP04114 AC092135.3-201ENST00000624151 1846 ntBASIC9.01□□□□□ -0.97
APOBP04114 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC9.01□□□□□ -0.97
APOBP04114 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC9.01□□□□□ -0.97
APOBP04114 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
APOBP04114 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
APOBP04114 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC9.01□□□□□ -0.97
APOBP04114 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC9.01□□□□□ -0.97
APOBP04114 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
APOBP04114 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
APOBP04114 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
APOBP04114 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
APOBP04114 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC9.01□□□□□ -0.97
APOBP04114 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
APOBP04114 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC9.01□□□□□ -0.97
APOBP04114 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC9.01□□□□□ -0.97
APOBP04114 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC9.01□□□□□ -0.97
APOBP04114 EEF1GP8-201ENST00000506566 1154 ntBASIC9.01□□□□□ -0.97
APOBP04114 AC087203.1-201ENST00000532111 1181 ntBASIC9.01□□□□□ -0.97
APOBP04114 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC9.01□□□□□ -0.97
APOBP04114 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC9.01□□□□□ -0.97
APOBP04114 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC9.01□□□□□ -0.97
APOBP04114 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC9.01□□□□□ -0.97
APOBP04114 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
APOBP04114 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
APOBP04114 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
APOBP04114 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC9.01□□□□□ -0.97
APOBP04114 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC9.01□□□□□ -0.97
APOBP04114 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
APOBP04114 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
APOBP04114 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
APOBP04114 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC9.01□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms