Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.48□□□□□ -0.25
APOA1P02647 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.48□□□□□ -0.25
APOA1P02647 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOA1P02647 AL356488.2-201ENST00000602755 427 ntBASIC13.48□□□□□ -0.25
APOA1P02647 AC005593.1-201ENST00000624894 515 ntBASIC13.48□□□□□ -0.25
APOA1P02647 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
APOA1P02647 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOA1P02647 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
APOA1P02647 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOA1P02647 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
APOA1P02647 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOA1P02647 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.48□□□□□ -0.25
APOA1P02647 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.48□□□□□ -0.25
APOA1P02647 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.48□□□□□ -0.25
APOA1P02647 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.48□□□□□ -0.25
APOA1P02647 AC084364.1-201ENST00000551967 1556 ntBASIC13.48□□□□□ -0.25
APOA1P02647 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.48□□□□□ -0.25
APOA1P02647 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
APOA1P02647 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOA1P02647 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
APOA1P02647 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
APOA1P02647 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOA1P02647 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOA1P02647 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.48□□□□□ -0.25
APOA1P02647 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.48□□□□□ -0.25
APOA1P02647 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
APOA1P02647 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
APOA1P02647 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.48□□□□□ -0.25
APOA1P02647 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
APOA1P02647 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
APOA1P02647 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOA1P02647 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOA1P02647 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
APOA1P02647 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOA1P02647 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOA1P02647 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
APOA1P02647 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOA1P02647 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.47□□□□□ -0.25
APOA1P02647 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOA1P02647 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOA1P02647 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC13.47□□□□□ -0.25
APOA1P02647 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOA1P02647 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOA1P02647 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.47□□□□□ -0.25
APOA1P02647 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.47□□□□□ -0.25
APOA1P02647 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOA1P02647 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOA1P02647 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.47□□□□□ -0.25
APOA1P02647 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOA1P02647 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.47□□□□□ -0.25
APOA1P02647 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOA1P02647 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOA1P02647 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.47□□□□□ -0.25
APOA1P02647 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
APOA1P02647 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.47□□□□□ -0.25
APOA1P02647 AC098859.1-201ENST00000502915 1238 ntBASIC13.47□□□□□ -0.25
APOA1P02647 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
APOA1P02647 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.47□□□□□ -0.25
APOA1P02647 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.47□□□□□ -0.25
APOA1P02647 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOA1P02647 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOA1P02647 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOA1P02647 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.47□□□□□ -0.25
APOA1P02647 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOA1P02647 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
APOA1P02647 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
APOA1P02647 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOA1P02647 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOA1P02647 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOA1P02647 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
APOA1P02647 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
APOA1P02647 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.47□□□□□ -0.25
APOA1P02647 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.47□□□□□ -0.25
APOA1P02647 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
APOA1P02647 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.47□□□□□ -0.25
APOA1P02647 AC138969.3-201ENST00000546612 1459 ntBASIC13.47□□□□□ -0.25
APOA1P02647 AC138932.2-201ENST00000548268 1459 ntBASIC13.47□□□□□ -0.25
APOA1P02647 AC126755.4-201ENST00000549796 1459 ntBASIC13.47□□□□□ -0.25
APOA1P02647 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.47□□□□□ -0.25
APOA1P02647 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
APOA1P02647 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
APOA1P02647 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOA1P02647 KRT8P37-201ENST00000451609 1420 ntBASIC13.47□□□□□ -0.25
APOA1P02647 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.47□□□□□ -0.25
APOA1P02647 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
APOA1P02647 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
APOA1P02647 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOA1P02647 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOA1P02647 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
APOA1P02647 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOA1P02647 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOA1P02647 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
APOA1P02647 AP000845.1-201ENST00000581677 2131 ntBASIC13.46□□□□□ -0.25
APOA1P02647 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.46□□□□□ -0.25
APOA1P02647 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
APOA1P02647 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.46□□□□□ -0.25
APOA1P02647 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
APOA1P02647 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOA1P02647 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
APOA1P02647 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms