Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LMNAP02545 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LMNAP02545 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LMNAP02545 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.82■□□□□ 0.12
LMNAP02545 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LMNAP02545 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LMNAP02545 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LMNAP02545 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LMNAP02545 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LMNAP02545 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.82■□□□□ 0.12
LMNAP02545 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMNAP02545 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LMNAP02545 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMNAP02545 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMNAP02545 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LMNAP02545 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.81■□□□□ 0.12
LMNAP02545 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LMNAP02545 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LMNAP02545 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMNAP02545 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMNAP02545 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMNAP02545 MSTO2P-201ENST00000314835 1709 ntBASIC15.81■□□□□ 0.12
LMNAP02545 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMNAP02545 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LMNAP02545 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.81■□□□□ 0.12
LMNAP02545 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.81■□□□□ 0.12
LMNAP02545 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.81■□□□□ 0.12
LMNAP02545 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.81■□□□□ 0.12
LMNAP02545 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMNAP02545 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.81■□□□□ 0.12
LMNAP02545 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.81■□□□□ 0.12
LMNAP02545 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LMNAP02545 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.81■□□□□ 0.12
LMNAP02545 AC120045.2-201ENST00000567334 178 ntBASIC15.81■□□□□ 0.12
LMNAP02545 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.81■□□□□ 0.12
LMNAP02545 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.81■□□□□ 0.12
LMNAP02545 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.81■□□□□ 0.12
LMNAP02545 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMNAP02545 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.81■□□□□ 0.12
LMNAP02545 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMNAP02545 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.81■□□□□ 0.12
LMNAP02545 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LMNAP02545 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LMNAP02545 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.81■□□□□ 0.12
LMNAP02545 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMNAP02545 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMNAP02545 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMNAP02545 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
LMNAP02545 AC005912.2-201ENST00000619492 2400 ntBASIC15.8■□□□□ 0.12
LMNAP02545 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMNAP02545 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LMNAP02545 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMNAP02545 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LMNAP02545 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.8■□□□□ 0.12
LMNAP02545 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMNAP02545 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMNAP02545 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMNAP02545 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
LMNAP02545 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.8■□□□□ 0.12
LMNAP02545 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMNAP02545 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMNAP02545 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.8■□□□□ 0.12
LMNAP02545 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LMNAP02545 MTX1P1-201ENST00000440904 838 ntBASIC15.8■□□□□ 0.12
LMNAP02545 FTLP1-201ENST00000449155 526 ntBASIC15.8■□□□□ 0.12
LMNAP02545 IMP3P2-201ENST00000489760 475 ntBASIC15.8■□□□□ 0.12
LMNAP02545 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LMNAP02545 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.8■□□□□ 0.12
LMNAP02545 AC245884.6-201ENST00000515672 1067 ntBASIC15.8■□□□□ 0.12
LMNAP02545 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.8■□□□□ 0.12
LMNAP02545 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMNAP02545 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.8■□□□□ 0.12
LMNAP02545 NDUFV2P1-201ENST00000596415 907 ntBASIC15.8■□□□□ 0.12
LMNAP02545 AL353726.2-201ENST00000623259 884 ntBASIC15.8■□□□□ 0.12
LMNAP02545 CU633904.3-201ENST00000624042 1029 ntBASIC15.8■□□□□ 0.12
LMNAP02545 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
LMNAP02545 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.8■□□□□ 0.12
LMNAP02545 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMNAP02545 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
LMNAP02545 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMNAP02545 AL031731.1-201ENST00000642131 2094 ntBASIC15.8■□□□□ 0.12
LMNAP02545 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LMNAP02545 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.8■□□□□ 0.12
LMNAP02545 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.8■□□□□ 0.12
LMNAP02545 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LMNAP02545 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMNAP02545 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LMNAP02545 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMNAP02545 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMNAP02545 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.8■□□□□ 0.12
LMNAP02545 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LMNAP02545 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LMNAP02545 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.79■□□□□ 0.12
LMNAP02545 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LMNAP02545 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LMNAP02545 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LMNAP02545 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LMNAP02545 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LMNAP02545 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LMNAP02545 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms