Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.63□□□□□ -0.07
KRT6AP02538 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.63□□□□□ -0.07
KRT6AP02538 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.63□□□□□ -0.07
KRT6AP02538 AC126335.2-201ENST00000623362 4637 ntBASIC14.63□□□□□ -0.07
KRT6AP02538 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
KRT6AP02538 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KRT6AP02538 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
KRT6AP02538 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KRT6AP02538 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KRT6AP02538 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.63□□□□□ -0.07
KRT6AP02538 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
KRT6AP02538 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
KRT6AP02538 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
KRT6AP02538 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KRT6AP02538 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
KRT6AP02538 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
KRT6AP02538 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.63□□□□□ -0.07
KRT6AP02538 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KRT6AP02538 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KRT6AP02538 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
KRT6AP02538 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.63□□□□□ -0.07
KRT6AP02538 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KRT6AP02538 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
KRT6AP02538 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.63□□□□□ -0.07
KRT6AP02538 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KRT6AP02538 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.63□□□□□ -0.07
KRT6AP02538 AC093004.1-201ENST00000508850 424 ntBASIC14.63□□□□□ -0.07
KRT6AP02538 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.63□□□□□ -0.07
KRT6AP02538 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.63□□□□□ -0.07
KRT6AP02538 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.63□□□□□ -0.07
KRT6AP02538 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.63□□□□□ -0.07
KRT6AP02538 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.63□□□□□ -0.07
KRT6AP02538 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
KRT6AP02538 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.63□□□□□ -0.07
KRT6AP02538 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
KRT6AP02538 BX539320.1-201ENST00000623759 877 ntBASIC14.63□□□□□ -0.07
KRT6AP02538 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
KRT6AP02538 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.63□□□□□ -0.07
KRT6AP02538 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
KRT6AP02538 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KRT6AP02538 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
KRT6AP02538 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KRT6AP02538 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
KRT6AP02538 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
KRT6AP02538 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
KRT6AP02538 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
KRT6AP02538 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
KRT6AP02538 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
KRT6AP02538 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.62□□□□□ -0.07
KRT6AP02538 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6AP02538 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.62□□□□□ -0.07
KRT6AP02538 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6AP02538 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6AP02538 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6AP02538 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.62□□□□□ -0.07
KRT6AP02538 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6AP02538 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
KRT6AP02538 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
KRT6AP02538 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
KRT6AP02538 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6AP02538 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.62□□□□□ -0.07
KRT6AP02538 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6AP02538 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
KRT6AP02538 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.62□□□□□ -0.07
KRT6AP02538 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6AP02538 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
KRT6AP02538 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6AP02538 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
KRT6AP02538 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6AP02538 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
KRT6AP02538 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
KRT6AP02538 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6AP02538 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.62□□□□□ -0.07
KRT6AP02538 MRPS18AP1-201ENST00000414458 589 ntBASIC14.62□□□□□ -0.07
KRT6AP02538 AC134915.1-201ENST00000426461 574 ntBASIC14.62□□□□□ -0.07
KRT6AP02538 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.62□□□□□ -0.07
KRT6AP02538 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.62□□□□□ -0.07
KRT6AP02538 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.62□□□□□ -0.07
KRT6AP02538 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.62□□□□□ -0.07
KRT6AP02538 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
KRT6AP02538 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.62□□□□□ -0.07
KRT6AP02538 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6AP02538 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.62□□□□□ -0.07
KRT6AP02538 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.62□□□□□ -0.07
KRT6AP02538 BRI3BPP1-201ENST00000594224 787 ntBASIC14.62□□□□□ -0.07
KRT6AP02538 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6AP02538 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6AP02538 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.62□□□□□ -0.07
KRT6AP02538 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
KRT6AP02538 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6AP02538 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.62□□□□□ -0.07
KRT6AP02538 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6AP02538 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6AP02538 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6AP02538 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.62□□□□□ -0.07
KRT6AP02538 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6AP02538 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.62□□□□□ -0.07
KRT6AP02538 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
KRT6AP02538 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
KRT6AP02538 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 507.2 ms