Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE6O95741 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE6O95741 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CPNE6O95741 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE6O95741 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.79□□□□□ -0.04
CPNE6O95741 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.79□□□□□ -0.04
CPNE6O95741 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE6O95741 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE6O95741 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE6O95741 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE6O95741 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CPNE6O95741 AL645937.2-201ENST00000396808 931 ntBASIC14.79□□□□□ -0.04
CPNE6O95741 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE6O95741 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE6O95741 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.79□□□□□ -0.04
CPNE6O95741 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE6O95741 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.79□□□□□ -0.04
CPNE6O95741 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE6O95741 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE6O95741 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE6O95741 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.79□□□□□ -0.04
CPNE6O95741 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.79□□□□□ -0.04
CPNE6O95741 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.79□□□□□ -0.04
CPNE6O95741 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.79□□□□□ -0.04
CPNE6O95741 LRRC59-203ENST00000576448 1531 ntBASIC14.79□□□□□ -0.04
CPNE6O95741 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CPNE6O95741 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.79□□□□□ -0.04
CPNE6O95741 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CPNE6O95741 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.79□□□□□ -0.04
CPNE6O95741 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.79□□□□□ -0.04
CPNE6O95741 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE6O95741 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.79□□□□□ -0.04
CPNE6O95741 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE6O95741 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.79□□□□□ -0.04
CPNE6O95741 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.79□□□□□ -0.04
CPNE6O95741 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CPNE6O95741 PRSS30P-206ENST00000641773 873 ntBASIC14.79□□□□□ -0.04
CPNE6O95741 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE6O95741 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE6O95741 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE6O95741 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE6O95741 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CPNE6O95741 AJ011931.1-201ENST00000618749 2492 ntBASIC14.78□□□□□ -0.04
CPNE6O95741 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CPNE6O95741 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.78□□□□□ -0.04
CPNE6O95741 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.78□□□□□ -0.04
CPNE6O95741 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CPNE6O95741 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.78□□□□□ -0.04
CPNE6O95741 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.78□□□□□ -0.04
CPNE6O95741 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.78□□□□□ -0.04
CPNE6O95741 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.78□□□□□ -0.04
CPNE6O95741 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 TPM3P8-201ENST00000330554 643 ntBASIC14.78□□□□□ -0.04
CPNE6O95741 MIR326-201ENST00000362220 95 ntBASIC14.78□□□□□ -0.04
CPNE6O95741 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.78□□□□□ -0.04
CPNE6O95741 MIR1202-201ENST00000408529 83 ntBASIC14.78□□□□□ -0.04
CPNE6O95741 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CPNE6O95741 AL590640.2-201ENST00000457038 527 ntBASIC14.78□□□□□ -0.04
CPNE6O95741 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.78□□□□□ -0.04
CPNE6O95741 AC099548.2-209ENST00000480264 625 ntBASIC14.78□□□□□ -0.04
CPNE6O95741 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.78□□□□□ -0.04
CPNE6O95741 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.78□□□□□ -0.04
CPNE6O95741 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CPNE6O95741 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.78□□□□□ -0.04
CPNE6O95741 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.78□□□□□ -0.04
CPNE6O95741 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.78□□□□□ -0.04
CPNE6O95741 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.78□□□□□ -0.04
CPNE6O95741 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CPNE6O95741 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CPNE6O95741 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.78□□□□□ -0.04
CPNE6O95741 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
CPNE6O95741 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE6O95741 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CPNE6O95741 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms