Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
MBD4O95243 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
MBD4O95243 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MBD4O95243 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.85■□□□□ 0.45
MBD4O95243 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.85■□□□□ 0.45
MBD4O95243 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MBD4O95243 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MBD4O95243 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
MBD4O95243 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MBD4O95243 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MBD4O95243 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.84■□□□□ 0.45
MBD4O95243 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MBD4O95243 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
MBD4O95243 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MBD4O95243 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MBD4O95243 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.84■□□□□ 0.45
MBD4O95243 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
MBD4O95243 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
MBD4O95243 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.84■□□□□ 0.45
MBD4O95243 AC018529.2-202ENST00000611482 3087 ntBASIC17.84■□□□□ 0.45
MBD4O95243 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
MBD4O95243 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MBD4O95243 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MBD4O95243 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MBD4O95243 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MBD4O95243 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MBD4O95243 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
MBD4O95243 MIR663B-201ENST00000408361 115 ntBASIC17.84■□□□□ 0.45
MBD4O95243 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MBD4O95243 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.84■□□□□ 0.45
MBD4O95243 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.84■□□□□ 0.45
MBD4O95243 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.84■□□□□ 0.45
MBD4O95243 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.84■□□□□ 0.45
MBD4O95243 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
MBD4O95243 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.84■□□□□ 0.45
MBD4O95243 AC005730.2-201ENST00000564549 1184 ntBASIC17.84■□□□□ 0.45
MBD4O95243 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.84■□□□□ 0.45
MBD4O95243 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.84■□□□□ 0.45
MBD4O95243 MIR4783-201ENST00000580343 82 ntBASIC17.84■□□□□ 0.45
MBD4O95243 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.84■□□□□ 0.45
MBD4O95243 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MBD4O95243 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MBD4O95243 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MBD4O95243 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MBD4O95243 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.84■□□□□ 0.45
MBD4O95243 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MBD4O95243 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MBD4O95243 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
MBD4O95243 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.84■□□□□ 0.45
MBD4O95243 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MBD4O95243 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MBD4O95243 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MBD4O95243 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.83■□□□□ 0.45
MBD4O95243 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
MBD4O95243 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
MBD4O95243 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
MBD4O95243 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.83■□□□□ 0.45
MBD4O95243 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.83■□□□□ 0.45
MBD4O95243 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
MBD4O95243 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
MBD4O95243 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
MBD4O95243 AC018442.1-201ENST00000421439 2061 ntBASIC17.83■□□□□ 0.45
MBD4O95243 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MBD4O95243 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MBD4O95243 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MBD4O95243 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
MBD4O95243 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MBD4O95243 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.83■□□□□ 0.44
MBD4O95243 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.83■□□□□ 0.44
MBD4O95243 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.83■□□□□ 0.44
MBD4O95243 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
MBD4O95243 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MBD4O95243 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MBD4O95243 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
MBD4O95243 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.83■□□□□ 0.44
MBD4O95243 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.83■□□□□ 0.44
MBD4O95243 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.83■□□□□ 0.44
MBD4O95243 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MBD4O95243 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.83■□□□□ 0.44
MBD4O95243 AC243960.2-201ENST00000600996 747 ntBASIC17.83■□□□□ 0.44
MBD4O95243 GPR182-203ENST00000622922 591 ntBASIC17.83■□□□□ 0.44
MBD4O95243 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.83■□□□□ 0.44
MBD4O95243 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MBD4O95243 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MBD4O95243 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
MBD4O95243 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MBD4O95243 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.83■□□□□ 0.44
MBD4O95243 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MBD4O95243 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.83■□□□□ 0.44
MBD4O95243 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MBD4O95243 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MBD4O95243 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.83■□□□□ 0.44
MBD4O95243 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MBD4O95243 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MBD4O95243 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.83■□□□□ 0.44
MBD4O95243 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MBD4O95243 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
MBD4O95243 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.83■□□□□ 0.44
MBD4O95243 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.82■□□□□ 0.44
MBD4O95243 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms