Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CCNKO75909 PI4KAP1-204ENST00000612579 1703 ntBASIC13.07□□□□□ -0.32
CCNKO75909 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.07□□□□□ -0.32
CCNKO75909 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CCNKO75909 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCNKO75909 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CCNKO75909 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.06□□□□□ -0.32
CCNKO75909 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
CCNKO75909 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CCNKO75909 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC13.06□□□□□ -0.32
CCNKO75909 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CCNKO75909 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC13.06□□□□□ -0.32
CCNKO75909 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.06□□□□□ -0.32
CCNKO75909 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.06□□□□□ -0.32
CCNKO75909 AC211429.1-201ENST00000415277 523 ntBASIC13.06□□□□□ -0.32
CCNKO75909 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.06□□□□□ -0.32
CCNKO75909 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.06□□□□□ -0.32
CCNKO75909 AC104819.1-201ENST00000504587 486 ntBASIC13.06□□□□□ -0.32
CCNKO75909 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.06□□□□□ -0.32
CCNKO75909 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.06□□□□□ -0.32
CCNKO75909 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.06□□□□□ -0.32
CCNKO75909 MIR4321-201ENST00000592276 80 ntBASIC13.06□□□□□ -0.32
CCNKO75909 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.06□□□□□ -0.32
CCNKO75909 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 AC092329.2-201ENST00000598402 547 ntBASIC13.06□□□□□ -0.32
CCNKO75909 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.06□□□□□ -0.32
CCNKO75909 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.06□□□□□ -0.32
CCNKO75909 SPTSSB-204ENST00000617024 1292 ntBASIC13.06□□□□□ -0.32
CCNKO75909 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.06□□□□□ -0.32
CCNKO75909 AL121956.5-201ENST00000625261 221 ntBASIC13.06□□□□□ -0.32
CCNKO75909 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.06□□□□□ -0.32
CCNKO75909 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 AC107375.1-201ENST00000564464 2231 ntBASIC13.06□□□□□ -0.32
CCNKO75909 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.06□□□□□ -0.32
CCNKO75909 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC13.06□□□□□ -0.32
CCNKO75909 AC102953.2-201ENST00000609755 3026 ntBASIC13.06□□□□□ -0.32
CCNKO75909 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CCNKO75909 AC092053.3-201ENST00000641308 4975 ntBASIC13.06□□□□□ -0.32
CCNKO75909 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.06□□□□□ -0.32
CCNKO75909 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CCNKO75909 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCNKO75909 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC13.06□□□□□ -0.32
CCNKO75909 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC13.06□□□□□ -0.32
CCNKO75909 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.06□□□□□ -0.32
CCNKO75909 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.06□□□□□ -0.32
CCNKO75909 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC13.06□□□□□ -0.32
CCNKO75909 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC13.06□□□□□ -0.32
CCNKO75909 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CCNKO75909 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CCNKO75909 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms