Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RFPL1O75677 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.11■□□□□ 0.01
RFPL1O75677 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
RFPL1O75677 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.11■□□□□ 0.01
RFPL1O75677 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.11■□□□□ 0.01
RFPL1O75677 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.11■□□□□ 0.01
RFPL1O75677 AC022447.6-201ENST00000515522 438 ntBASIC15.11■□□□□ 0.01
RFPL1O75677 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.11■□□□□ 0.01
RFPL1O75677 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.11■□□□□ 0.01
RFPL1O75677 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 AC044860.1-202ENST00000559481 777 ntBASIC15.11■□□□□ 0.01
RFPL1O75677 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.11■□□□□ 0.01
RFPL1O75677 AC008494.3-201ENST00000606615 944 ntBASIC15.11■□□□□ 0.01
RFPL1O75677 AL162274.1-201ENST00000617191 1098 ntBASIC15.11■□□□□ 0.01
RFPL1O75677 AC007431.3-201ENST00000623221 587 ntBASIC15.11■□□□□ 0.01
RFPL1O75677 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.11■□□□□ 0.01
RFPL1O75677 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 AC011474.4-201ENST00000623523 2076 ntBASIC15.11■□□□□ 0.01
RFPL1O75677 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RFPL1O75677 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RFPL1O75677 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.11■□□□□ 0.01
RFPL1O75677 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RFPL1O75677 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RFPL1O75677 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.11■□□□□ 0.01
RFPL1O75677 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.11■□□□□ 0.01
RFPL1O75677 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFPL1O75677 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFPL1O75677 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFPL1O75677 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.1■□□□□ 0.01
RFPL1O75677 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFPL1O75677 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.1■□□□□ 0.01
RFPL1O75677 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFPL1O75677 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFPL1O75677 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFPL1O75677 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RFPL1O75677 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RFPL1O75677 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFPL1O75677 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFPL1O75677 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFPL1O75677 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFPL1O75677 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.1■□□□□ 0.01
RFPL1O75677 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFPL1O75677 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.1■□□□□ 0.01
RFPL1O75677 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RFPL1O75677 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.1■□□□□ 0.01
RFPL1O75677 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFPL1O75677 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RFPL1O75677 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.1■□□□□ 0.01
RFPL1O75677 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.1■□□□□ 0.01
RFPL1O75677 AC055876.2-201ENST00000531834 546 ntBASIC15.1■□□□□ 0.01
RFPL1O75677 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.1■□□□□ 0.01
RFPL1O75677 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.1■□□□□ 0.01
RFPL1O75677 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.1■□□□□ 0.01
RFPL1O75677 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.1■□□□□ 0.01
RFPL1O75677 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.1■□□□□ 0.01
RFPL1O75677 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFPL1O75677 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RFPL1O75677 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RFPL1O75677 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.1■□□□□ 0.01
RFPL1O75677 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFPL1O75677 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFPL1O75677 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFPL1O75677 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RFPL1O75677 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.1■□□□□ 0.01
RFPL1O75677 OR2I1P-210ENST00000642037 4691 ntBASIC15.1■□□□□ 0.01
RFPL1O75677 AC093525.8-201ENST00000624099 1342 ntBASIC15.1■□□□□ 0.01
RFPL1O75677 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFPL1O75677 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.1■□□□□ 0.01
RFPL1O75677 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.1■□□□□ 0.01
RFPL1O75677 AGGF1P1-201ENST00000509500 2073 ntBASIC15.1■□□□□ 0.01
RFPL1O75677 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFPL1O75677 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFPL1O75677 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFPL1O75677 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
RFPL1O75677 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RFPL1O75677 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RFPL1O75677 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFPL1O75677 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.09■□□□□ 0.01
RFPL1O75677 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.09■□□□□ 0.01
RFPL1O75677 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RFPL1O75677 MBLAC2-202ENST00000514906 1936 ntBASIC15.09■□□□□ 0.01
RFPL1O75677 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFPL1O75677 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFPL1O75677 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RFPL1O75677 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.09■□□□□ 0.01
RFPL1O75677 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms