Protein–RNA interactions for Protein: O75533

SF3B1, Splicing factor 3B subunit 1, humanhuman

Known RBP eCLIP

Length 1,304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1O75533 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.844e-7■■■■■ 86.2
SF3B1O75533 KCTD20-206ENST00000474988 1618 ntTSL 220.26■□□□□ 0.834e-7■■■■■ 86.2
SF3B1O75533 PTCD3-204ENST00000418628 532 ntTSL 420.25■□□□□ 0.834e-7■■■■■ 86.2
SF3B1O75533 PTCD3-217ENST00000488801 568 ntTSL 420.25■□□□□ 0.834e-7■■■■■ 86.2
SF3B1O75533 KCTD20-209ENST00000498267 547 ntTSL 420.18■□□□□ 0.824e-7■■■■■ 86.2
SF3B1O75533 KCTD20-205ENST00000460983 597 ntTSL 420.18■□□□□ 0.824e-7■■■■■ 86.2
SF3B1O75533 DVL2-203ENST00000572285 1240 ntTSL 1 (best)20.16■□□□□ 0.823e-8■■■■■ 86.2
SF3B1O75533 ZNF432-204ENST00000598446 862 ntTSL 320.16■□□□□ 0.824e-7■■■■■ 86.2
SF3B1O75533 PCK2-215ENST00000561050 1856 ntTSL 220.11■□□□□ 0.814e-7■■■■■ 86.2
SF3B1O75533 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.1■□□□□ 0.814e-7■■■■■ 86.2
SF3B1O75533 CERS4-216ENST00000600912 440 ntTSL 320.08■□□□□ 0.814e-7■■■■■ 86.2
SF3B1O75533 NFKBIB-206ENST00000576510 820 ntTSL 320.02■□□□□ 0.794e-7■■■■■ 86.2
SF3B1O75533 MIB2-222ENST00000507229 2582 ntTSL 219.99■□□□□ 0.798e-11■■■■■ 86.2
SF3B1O75533 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.97■□□□□ 0.794e-7■■■■■ 86.2
SF3B1O75533 RNF220-212ENST00000475378 916 ntTSL 319.97■□□□□ 0.795e-6■■■■■ 86.2
SF3B1O75533 TADA2A-201ENST00000610834 689 ntTSL 219.97■□□□□ 0.794e-7■■■■■ 86.2
SF3B1O75533 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.784e-7■■■■■ 86.2
SF3B1O75533 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.784e-7■■■■■ 86.2
SF3B1O75533 NDUFA12-203ENST00000546788 563 ntTSL 519.93■□□□□ 0.784e-7■■■■■ 86.2
SF3B1O75533 TSSC2-201ENST00000450217 709 ntBASIC19.92■□□□□ 0.784e-7■■■■■ 86.2
SF3B1O75533 PHYKPL-210ENST00000493197 1969 ntTSL 219.92■□□□□ 0.785e-6■■■■■ 86.2
SF3B1O75533 RUVBL2-204ENST00000594338 1853 ntTSL 519.89■□□□□ 0.774e-7■■■■■ 86.2
SF3B1O75533 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.87■□□□□ 0.774e-7■■■■■ 86.2
SF3B1O75533 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.774e-7■■■■■ 86.2
SF3B1O75533 TADA2A-204ENST00000614122 1003 ntTSL 519.8■□□□□ 0.764e-7■■■■■ 86.2
SF3B1O75533 STARD3-218ENST00000580551 554 ntTSL 219.76■□□□□ 0.754e-7■■■■■ 86.2
SF3B1O75533 SOCS3-202ENST00000587578 361 ntTSL 419.73■□□□□ 0.754e-7■■■■■ 86.2
SF3B1O75533 TRIP6-202ENST00000417475 992 ntTSL 1 (best)19.73■□□□□ 0.754e-7■■■■■ 86.2
SF3B1O75533 MVB12A-206ENST00000528659 511 ntTSL 219.69■□□□□ 0.744e-7■■■■■ 86.2
SF3B1O75533 TALDO1-202ENST00000528070 856 ntTSL 519.65■□□□□ 0.742e-7■■■■■ 86.2
SF3B1O75533 RAB6B-206ENST00000488969 506 ntTSL 419.65■□□□□ 0.744e-7■■■■■ 86.2
SF3B1O75533 NOM1-205ENST00000475176 714 ntTSL 319.57■□□□□ 0.724e-7■■■■■ 86.2
SF3B1O75533 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.724e-7■■■■■ 86.2
SF3B1O75533 MYADM-207ENST00000421337 1009 ntTSL 219.56■□□□□ 0.724e-7■■■■■ 86.2
SF3B1O75533 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.715e-6■■■■■ 86.2
SF3B1O75533 SIRT6-206ENST00000596119 1537 ntTSL 519.47■□□□□ 0.714e-7■■■■■ 86.2
SF3B1O75533 DDX56-207ENST00000448192 691 ntTSL 219.44■□□□□ 0.74e-7■■■■■ 86.2
SF3B1O75533 CCNL1-207ENST00000465947 793 ntTSL 519.44■□□□□ 0.73e-8■■■■■ 86.2
SF3B1O75533 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.42■□□□□ 0.74e-7■■■■■ 86.2
SF3B1O75533 TRIP6-206ENST00000476870 1750 ntTSL 219.42■□□□□ 0.74e-7■■■■■ 86.2
SF3B1O75533 PEX5-203ENST00000396637 1508 ntTSL 519.4■□□□□ 0.74e-7■■■■■ 86.2
SF3B1O75533 KPTN-204ENST00000595484 638 ntTSL 319.39■□□□□ 0.694e-7■■■■■ 86.2
SF3B1O75533 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.694e-7■■■■■ 86.2
SF3B1O75533 DANCR-203ENST00000441504 336 ntTSL 219.33■□□□□ 0.694e-7■■■■■ 86.2
SF3B1O75533 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.31■□□□□ 0.684e-7■■■■■ 86.2
SF3B1O75533 SIRT6-209ENST00000599365 1372 ntTSL 1 (best)19.3■□□□□ 0.684e-7■■■■■ 86.2
SF3B1O75533 NFKBIB-203ENST00000509705 2200 ntTSL 219.26■□□□□ 0.674e-7■■■■■ 86.2
SF3B1O75533 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.23■□□□□ 0.672e-6■■■■■ 86.2
SF3B1O75533 FGFR3-207ENST00000474521 545 ntTSL 219.23■□□□□ 0.674e-7■■■■■ 86.2
SF3B1O75533 LMF2-204ENST00000505981 824 ntTSL 519.2■□□□□ 0.664e-7■■■■■ 86.2
SF3B1O75533 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.19■□□□□ 0.664e-7■■■■■ 86.2
SF3B1O75533 SIRT6-213ENST00000601069 1260 ntTSL 219.19■□□□□ 0.664e-7■■■■■ 86.2
SF3B1O75533 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.13■□□□□ 0.653e-13■■■■■ 86.2
SF3B1O75533 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.12■□□□□ 0.654e-7■■■■■ 86.2
SF3B1O75533 KCTD20-203ENST00000443316 406 ntTSL 219.11■□□□□ 0.654e-7■■■■■ 86.2
SF3B1O75533 E4F1-205ENST00000564930 297 ntTSL 319.07■□□□□ 0.644e-7■■■■■ 86.2
SF3B1O75533 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.644e-7■■■■■ 86.2
SF3B1O75533 WDR59-214ENST00000568323 558 ntTSL 519.05■□□□□ 0.644e-7■■■■■ 86.2
SF3B1O75533 RHOT1-209ENST00000581031 3013 ntTSL 1 (best)18.99■□□□□ 0.632e-6■■■■■ 86.2
SF3B1O75533 STARD3-212ENST00000578254 562 ntTSL 518.98■□□□□ 0.634e-7■■■■■ 86.2
SF3B1O75533 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.634e-7■■■■■ 86.2
SF3B1O75533 TMEM179B-204ENST00000532586 839 ntTSL 218.96■□□□□ 0.634e-7■■■■■ 86.2
SF3B1O75533 STARD3-216ENST00000579479 560 ntTSL 418.96■□□□□ 0.634e-7■■■■■ 86.2
SF3B1O75533 PCK2-206ENST00000558674 2189 ntTSL 218.94■□□□□ 0.624e-7■■■■■ 86.2
SF3B1O75533 SIRT6-211ENST00000600540 1407 ntTSL 218.94■□□□□ 0.624e-7■■■■■ 86.2
SF3B1O75533 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.91■□□□□ 0.624e-7■■■■■ 86.2
SF3B1O75533 RPLP0-218ENST00000550856 1003 ntTSL 218.88■□□□□ 0.614e-7■■■■■ 86.2
SF3B1O75533 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.614e-7■■■■■ 86.2
SF3B1O75533 ARHGDIA-209ENST00000582309 628 ntTSL 218.8■□□□□ 0.64e-7■■■■■ 86.2
SF3B1O75533 SIRT6-212ENST00000600938 1473 ntTSL 218.71■□□□□ 0.594e-7■■■■■ 86.2
SF3B1O75533 SIRT6-215ENST00000601571 716 ntTSL 218.7■□□□□ 0.584e-7■■■■■ 86.2
SF3B1O75533 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.7■□□□□ 0.584e-7■■■■■ 86.2
SF3B1O75533 SIRT6-207ENST00000596298 717 ntTSL 218.7■□□□□ 0.584e-7■■■■■ 86.2
SF3B1O75533 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.69■□□□□ 0.584e-7■■■■■ 86.2
SF3B1O75533 TRIP6-205ENST00000463125 835 ntTSL 218.62■□□□□ 0.574e-7■■■■■ 86.2
SF3B1O75533 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.61■□□□□ 0.573e-8■■■■■ 86.2
SF3B1O75533 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.6■□□□□ 0.574e-7■■■■■ 86.2
SF3B1O75533 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.564e-7■■■■■ 86.2
SF3B1O75533 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.57■□□□□ 0.564e-7■■■■■ 86.2
SF3B1O75533 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.52■□□□□ 0.564e-7■■■■■ 86.2
SF3B1O75533 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.564e-7■■■■■ 86.2
SF3B1O75533 NECAB3-208ENST00000480994 732 ntTSL 518.51■□□□□ 0.554e-6■■■■■ 86.2
SF3B1O75533 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.554e-7■■■■■ 86.2
SF3B1O75533 EXO1-203ENST00000423131 950 ntTSL 518.5■□□□□ 0.554e-7■■■■■ 86.2
SF3B1O75533 SIRT6-210ENST00000599394 607 ntTSL 418.49■□□□□ 0.554e-7■■■■■ 86.2
SF3B1O75533 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.554e-7■■■■■ 86.2
SF3B1O75533 ARHGDIA-206ENST00000580033 547 ntTSL 418.43■□□□□ 0.544e-7■■■■■ 86.2
SF3B1O75533 PCK2-211ENST00000559837 756 ntTSL 318.42■□□□□ 0.544e-7■■■■■ 86.2
SF3B1O75533 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.544e-7■■■■■ 86.2
SF3B1O75533 NUP93-221ENST00000569863 630 ntTSL 418.41■□□□□ 0.544e-7■■■■■ 86.2
SF3B1O75533 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.544e-7■■■■■ 86.2
SF3B1O75533 CCNL1-208ENST00000466101 911 ntTSL 218.36■□□□□ 0.533e-8■■■■■ 86.2
SF3B1O75533 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.533e-8■■■■■ 86.2
SF3B1O75533 AP4B1-202ENST00000369564 1225 ntTSL 518.33■□□□□ 0.534e-7■■■■■ 86.2
SF3B1O75533 TRIOBP-207ENST00000417857 919 ntAPPRIS ALT2 TSL 518.33■□□□□ 0.534e-7■■■■■ 86.2
SF3B1O75533 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.523e-8■■■■■ 86.2
SF3B1O75533 CCNL1-226ENST00000631619 2457 ntTSL 518.31■□□□□ 0.523e-8■■■■■ 86.2
SF3B1O75533 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.514e-7■■■■■ 86.2
SF3B1O75533 EPC1-205ENST00000469059 591 ntTSL 518.21■□□□□ 0.514e-7■■■■■ 86.2
SF3B1O75533 ARF1-207ENST00000477451 789 ntTSL 518.19■□□□□ 0.54e-7■■■■■ 86.2
Retrieved 100 of 46,956 protein–RNA pairs in 1538.4 ms