Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 MIR943-201ENST00000401286 94 ntBASIC14.39□□□□□ -0.11
CLOCKO15516 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.39□□□□□ -0.11
CLOCKO15516 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.39□□□□□ -0.11
CLOCKO15516 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.39□□□□□ -0.11
CLOCKO15516 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.39□□□□□ -0.11
CLOCKO15516 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.39□□□□□ -0.11
CLOCKO15516 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 IGHV3-42-201ENST00000520410 361 ntBASIC14.39□□□□□ -0.11
CLOCKO15516 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.39□□□□□ -0.11
CLOCKO15516 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.39□□□□□ -0.11
CLOCKO15516 SPCS2P1-201ENST00000561636 679 ntBASIC14.39□□□□□ -0.11
CLOCKO15516 AC026150.2-201ENST00000564693 1156 ntBASIC14.39□□□□□ -0.11
CLOCKO15516 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.39□□□□□ -0.11
CLOCKO15516 AC005498.2-205ENST00000593218 784 ntBASIC14.39□□□□□ -0.11
CLOCKO15516 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 AP001059.3-201ENST00000619053 235 ntBASIC14.39□□□□□ -0.11
CLOCKO15516 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.39□□□□□ -0.11
CLOCKO15516 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.39□□□□□ -0.11
CLOCKO15516 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CLOCKO15516 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.39□□□□□ -0.11
CLOCKO15516 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.39□□□□□ -0.11
CLOCKO15516 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CLOCKO15516 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
CLOCKO15516 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CLOCKO15516 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.39□□□□□ -0.11
CLOCKO15516 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
CLOCKO15516 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CLOCKO15516 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CLOCKO15516 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.38□□□□□ -0.11
CLOCKO15516 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.38□□□□□ -0.11
CLOCKO15516 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.38□□□□□ -0.11
CLOCKO15516 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.38□□□□□ -0.11
CLOCKO15516 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.38□□□□□ -0.11
CLOCKO15516 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.38□□□□□ -0.11
CLOCKO15516 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
CLOCKO15516 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.38□□□□□ -0.11
CLOCKO15516 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.38□□□□□ -0.11
CLOCKO15516 SPDYE7P-202ENST00000420373 878 ntBASIC14.38□□□□□ -0.11
CLOCKO15516 AC107890.1-201ENST00000422478 521 ntBASIC14.38□□□□□ -0.11
CLOCKO15516 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.38□□□□□ -0.11
CLOCKO15516 BCRP1-201ENST00000444246 691 ntBASIC14.38□□□□□ -0.11
CLOCKO15516 KLF2P3-201ENST00000451977 1087 ntBASIC14.38□□□□□ -0.11
CLOCKO15516 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.38□□□□□ -0.11
CLOCKO15516 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 AC069262.1-201ENST00000539058 672 ntBASIC14.38□□□□□ -0.11
CLOCKO15516 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.38□□□□□ -0.11
CLOCKO15516 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.38□□□□□ -0.11
CLOCKO15516 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.38□□□□□ -0.11
CLOCKO15516 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CLOCKO15516 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.38□□□□□ -0.11
CLOCKO15516 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CLOCKO15516 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.38□□□□□ -0.11
CLOCKO15516 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CLOCKO15516 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.38□□□□□ -0.11
CLOCKO15516 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLOCKO15516 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLOCKO15516 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLOCKO15516 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.37□□□□□ -0.11
CLOCKO15516 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLOCKO15516 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLOCKO15516 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLOCKO15516 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLOCKO15516 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CLOCKO15516 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms