Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NDUFA1O15239 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC10.35□□□□□ -0.75
NDUFA1O15239 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC10.35□□□□□ -0.75
NDUFA1O15239 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC10.35□□□□□ -0.75
NDUFA1O15239 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
NDUFA1O15239 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
NDUFA1O15239 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC10.35□□□□□ -0.75
NDUFA1O15239 FUK-202ENST00000378912 3925 ntTSL 2 BASIC10.35□□□□□ -0.75
NDUFA1O15239 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NDUFA1O15239 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC10.35□□□□□ -0.75
NDUFA1O15239 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
NDUFA1O15239 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
NDUFA1O15239 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
NDUFA1O15239 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
NDUFA1O15239 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
NDUFA1O15239 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 DGCR9-201ENST00000609630 2415 ntBASIC10.34□□□□□ -0.75
NDUFA1O15239 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC10.34□□□□□ -0.75
NDUFA1O15239 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC10.34□□□□□ -0.75
NDUFA1O15239 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
NDUFA1O15239 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
NDUFA1O15239 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
NDUFA1O15239 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
NDUFA1O15239 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
NDUFA1O15239 CD82-202ENST00000342935 967 ntTSL 5 BASIC10.34□□□□□ -0.75
NDUFA1O15239 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
NDUFA1O15239 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC10.34□□□□□ -0.75
NDUFA1O15239 RPP21-221ENST00000428040 594 ntTSL 2 BASIC10.34□□□□□ -0.75
NDUFA1O15239 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC10.34□□□□□ -0.75
NDUFA1O15239 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC10.34□□□□□ -0.75
NDUFA1O15239 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 ALG1L8P-201ENST00000533887 760 ntBASIC10.34□□□□□ -0.75
NDUFA1O15239 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC10.34□□□□□ -0.75
NDUFA1O15239 AC018529.1-201ENST00000613063 361 ntBASIC10.34□□□□□ -0.75
NDUFA1O15239 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
NDUFA1O15239 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC10.34□□□□□ -0.75
NDUFA1O15239 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC10.34□□□□□ -0.75
NDUFA1O15239 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC10.34□□□□□ -0.75
NDUFA1O15239 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 ELL2P1-201ENST00000413990 1906 ntBASIC10.34□□□□□ -0.75
NDUFA1O15239 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
NDUFA1O15239 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC10.34□□□□□ -0.75
NDUFA1O15239 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
NDUFA1O15239 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC10.34□□□□□ -0.75
NDUFA1O15239 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 SLC6A6P1-201ENST00000413933 1850 ntBASIC10.34□□□□□ -0.75
NDUFA1O15239 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC10.34□□□□□ -0.75
NDUFA1O15239 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC10.34□□□□□ -0.75
NDUFA1O15239 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
NDUFA1O15239 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
NDUFA1O15239 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
NDUFA1O15239 AC027612.1-201ENST00000445234 2395 ntBASIC10.33□□□□□ -0.76
NDUFA1O15239 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
NDUFA1O15239 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
NDUFA1O15239 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
NDUFA1O15239 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
NDUFA1O15239 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC10.33□□□□□ -0.76
NDUFA1O15239 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms