Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.81■□□□□ 0.12
CLDN5O00501 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.81■□□□□ 0.12
CLDN5O00501 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.81■□□□□ 0.12
CLDN5O00501 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.81■□□□□ 0.12
CLDN5O00501 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.81■□□□□ 0.12
CLDN5O00501 AC013726.1-201ENST00000563747 2285 ntBASIC15.81■□□□□ 0.12
CLDN5O00501 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.81■□□□□ 0.12
CLDN5O00501 AC015818.8-201ENST00000587907 1519 ntBASIC15.81■□□□□ 0.12
CLDN5O00501 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.81■□□□□ 0.12
CLDN5O00501 AL358472.3-201ENST00000608147 415 ntBASIC15.81■□□□□ 0.12
CLDN5O00501 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.81■□□□□ 0.12
CLDN5O00501 AC091271.1-201ENST00000611877 1162 ntBASIC15.81■□□□□ 0.12
CLDN5O00501 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.81■□□□□ 0.12
CLDN5O00501 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.81■□□□□ 0.12
CLDN5O00501 AC002472.3-201ENST00000640124 621 ntBASIC15.81■□□□□ 0.12
CLDN5O00501 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN5O00501 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN5O00501 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.81■□□□□ 0.12
CLDN5O00501 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.81■□□□□ 0.12
CLDN5O00501 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN5O00501 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN5O00501 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CLDN5O00501 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN5O00501 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
CLDN5O00501 LINC01101-201ENST00000622953 1884 ntBASIC15.8■□□□□ 0.12
CLDN5O00501 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN5O00501 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN5O00501 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN5O00501 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN5O00501 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN5O00501 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN5O00501 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN5O00501 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN5O00501 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN5O00501 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN5O00501 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN5O00501 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN5O00501 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN5O00501 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN5O00501 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLDN5O00501 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN5O00501 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN5O00501 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.8■□□□□ 0.12
CLDN5O00501 BTBD6P1-201ENST00000412176 1267 ntBASIC15.8■□□□□ 0.12
CLDN5O00501 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.8■□□□□ 0.12
CLDN5O00501 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN5O00501 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.8■□□□□ 0.12
CLDN5O00501 AP001002.3-201ENST00000623482 206 ntBASIC15.8■□□□□ 0.12
CLDN5O00501 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN5O00501 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN5O00501 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN5O00501 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN5O00501 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CLDN5O00501 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN5O00501 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLDN5O00501 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN5O00501 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN5O00501 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN5O00501 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN5O00501 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CLDN5O00501 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLDN5O00501 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN5O00501 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN5O00501 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN5O00501 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN5O00501 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN5O00501 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN5O00501 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN5O00501 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN5O00501 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN5O00501 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN5O00501 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CLDN5O00501 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN5O00501 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN5O00501 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.79■□□□□ 0.12
CLDN5O00501 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.79■□□□□ 0.12
CLDN5O00501 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN5O00501 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CLDN5O00501 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.79■□□□□ 0.12
CLDN5O00501 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.79■□□□□ 0.12
CLDN5O00501 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN5O00501 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN5O00501 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN5O00501 AL096828.3-201ENST00000615354 462 ntBASIC15.79■□□□□ 0.12
CLDN5O00501 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN5O00501 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN5O00501 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN5O00501 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN5O00501 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN5O00501 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CLDN5O00501 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN5O00501 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN5O00501 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN5O00501 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN5O00501 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN5O00501 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN5O00501 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN5O00501 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN5O00501 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN5O00501 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms